| imports: | |
| - $import scripts | |
| - $import scripts.inference | |
| args: | |
| run_extract : False | |
| input_dir : "/path/to/data" | |
| extracted_dir : "/path/to/extracted/data" | |
| input_format : "dicom" | |
| create_dataset : True | |
| dataset_name : "my_dataset_name" | |
| output_dir : "/path/to/model/output" | |
| run_inference : True | |
| create_tables : True | |
| # create visuals | |
| binary_mask : False | |
| binary_mask_overlay : True | |
| instance_mask_overlay : False | |
| inference: | |
| - $scripts.inference.main(@args) | |