Spaces:
Running
Running
create a local mcp_server gradio app that will become the private space.
Browse files- .gitignore +1 -3
- .mcp.json +18 -0
- create_test_db.py +24 -0
- data/export.xml +346 -0
- mcp_server.py +182 -0
.gitignore
CHANGED
@@ -8,6 +8,4 @@ wheels/
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# Virtual environments
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.venv
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.DS_Store
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-
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-
data
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# Virtual environments
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.venv
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.DS_Store
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.mcp.json
ADDED
@@ -0,0 +1,18 @@
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{
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"mcpServers": {
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"playwright": {
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"command": "npx",
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"args": [
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"@playwright/mcp@latest"
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]
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},
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"sqlite": {
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"command": "uvx",
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"args": [
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"mcp-server-sqlite",
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"--db-path",
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"data/health_data.db"
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]
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}
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}
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}
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create_test_db.py
ADDED
@@ -0,0 +1,24 @@
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#!/usr/bin/env python3
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"""Create a test SQLite database from the export.xml file."""
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from src.parser.parser import AppleHealthParser
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import os
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def main():
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xml_file = "data/export.xml"
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db_file = "data/health_data.db"
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# Remove existing database if it exists
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if os.path.exists(db_file):
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os.remove(db_file)
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print(f"Removed existing {db_file}")
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# Create the parser with no date cutoff to include all records
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from datetime import timedelta
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parser = AppleHealthParser(db_path=db_file, data_cutoff=timedelta(days=36500)) # 100 years
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print(f"Parsing {xml_file}...")
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parser.parse_file(xml_file)
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print(f"Successfully created {db_file}")
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if __name__ == "__main__":
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main()
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data/export.xml
ADDED
@@ -0,0 +1,346 @@
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1 |
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<?xml version="1.0" encoding="UTF-8"?>
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<!DOCTYPE HealthData [
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<!-- HealthKit Export Version: 14 -->
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<!ELEMENT HealthData (ExportDate,Me,(Record|Correlation|Workout|ActivitySummary|ClinicalRecord|Audiogram|VisionPrescription)*)>
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<!ATTLIST HealthData
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+
locale CDATA #REQUIRED
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>
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<!ELEMENT ExportDate EMPTY>
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9 |
+
<!ATTLIST ExportDate
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+
value CDATA #REQUIRED
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+
>
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<!ELEMENT Me EMPTY>
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+
<!ATTLIST Me
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+
HKCharacteristicTypeIdentifierDateOfBirth CDATA #REQUIRED
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+
HKCharacteristicTypeIdentifierBiologicalSex CDATA #REQUIRED
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+
HKCharacteristicTypeIdentifierBloodType CDATA #REQUIRED
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+
HKCharacteristicTypeIdentifierFitzpatrickSkinType CDATA #REQUIRED
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+
HKCharacteristicTypeIdentifierCardioFitnessMedicationsUse CDATA #REQUIRED
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+
>
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<!ELEMENT Record ((MetadataEntry|HeartRateVariabilityMetadataList)*)>
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+
<!ATTLIST Record
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+
type CDATA #REQUIRED
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+
unit CDATA #IMPLIED
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+
value CDATA #IMPLIED
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25 |
+
sourceName CDATA #REQUIRED
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26 |
+
sourceVersion CDATA #IMPLIED
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27 |
+
device CDATA #IMPLIED
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28 |
+
creationDate CDATA #IMPLIED
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29 |
+
startDate CDATA #REQUIRED
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30 |
+
endDate CDATA #REQUIRED
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31 |
+
>
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32 |
+
<!-- Note: Any Records that appear as children of a correlation also appear as top-level records in this document. -->
|
33 |
+
<!ELEMENT Correlation ((MetadataEntry|Record)*)>
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34 |
+
<!ATTLIST Correlation
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35 |
+
type CDATA #REQUIRED
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36 |
+
sourceName CDATA #REQUIRED
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37 |
+
sourceVersion CDATA #IMPLIED
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38 |
+
device CDATA #IMPLIED
|
39 |
+
creationDate CDATA #IMPLIED
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40 |
+
startDate CDATA #REQUIRED
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41 |
+
endDate CDATA #REQUIRED
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42 |
+
>
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43 |
+
<!ELEMENT Workout ((MetadataEntry|WorkoutEvent|WorkoutRoute|WorkoutStatistics)*)>
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44 |
+
<!ATTLIST Workout
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45 |
+
workoutActivityType CDATA #REQUIRED
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46 |
+
duration CDATA #IMPLIED
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47 |
+
durationUnit CDATA #IMPLIED
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48 |
+
totalDistance CDATA #IMPLIED
|
49 |
+
totalDistanceUnit CDATA #IMPLIED
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50 |
+
totalEnergyBurned CDATA #IMPLIED
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51 |
+
totalEnergyBurnedUnit CDATA #IMPLIED
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52 |
+
sourceName CDATA #REQUIRED
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53 |
+
sourceVersion CDATA #IMPLIED
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54 |
+
device CDATA #IMPLIED
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55 |
+
creationDate CDATA #IMPLIED
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56 |
+
startDate CDATA #REQUIRED
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57 |
+
endDate CDATA #REQUIRED
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58 |
+
>
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59 |
+
<!ELEMENT WorkoutActivity ((MetadataEntry)*)>
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60 |
+
<!ATTLIST WorkoutActivity
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61 |
+
uuid CDATA #REQUIRED
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62 |
+
startDate CDATA #REQUIRED
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63 |
+
endDate CDATA #IMPLIED
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64 |
+
duration CDATA #IMPLIED
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65 |
+
durationUnit CDATA #IMPLIED
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66 |
+
>
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67 |
+
<!ELEMENT WorkoutEvent ((MetadataEntry)*)>
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68 |
+
<!ATTLIST WorkoutEvent
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69 |
+
type CDATA #REQUIRED
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70 |
+
date CDATA #REQUIRED
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71 |
+
duration CDATA #IMPLIED
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72 |
+
durationUnit CDATA #IMPLIED
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73 |
+
>
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74 |
+
<!ELEMENT WorkoutStatistics EMPTY>
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75 |
+
<!ATTLIST WorkoutStatistics
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76 |
+
type CDATA #REQUIRED
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77 |
+
startDate CDATA #REQUIRED
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78 |
+
endDate CDATA #REQUIRED
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79 |
+
average CDATA #IMPLIED
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80 |
+
minimum CDATA #IMPLIED
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81 |
+
maximum CDATA #IMPLIED
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82 |
+
sum CDATA #IMPLIED
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83 |
+
unit CDATA #IMPLIED
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84 |
+
>
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85 |
+
<!ELEMENT WorkoutRoute ((MetadataEntry|FileReference)*)>
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86 |
+
<!ATTLIST WorkoutRoute
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87 |
+
sourceName CDATA #REQUIRED
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88 |
+
sourceVersion CDATA #IMPLIED
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89 |
+
device CDATA #IMPLIED
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90 |
+
creationDate CDATA #IMPLIED
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91 |
+
startDate CDATA #REQUIRED
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92 |
+
endDate CDATA #REQUIRED
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93 |
+
>
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94 |
+
<!ELEMENT FileReference EMPTY>
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95 |
+
<!ATTLIST FileReference
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96 |
+
path CDATA #REQUIRED
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97 |
+
>
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98 |
+
<!ELEMENT ActivitySummary EMPTY>
|
99 |
+
<!ATTLIST ActivitySummary
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100 |
+
dateComponents CDATA #IMPLIED
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101 |
+
activeEnergyBurned CDATA #IMPLIED
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102 |
+
activeEnergyBurnedGoal CDATA #IMPLIED
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103 |
+
activeEnergyBurnedUnit CDATA #IMPLIED
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104 |
+
appleMoveTime CDATA #IMPLIED
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105 |
+
appleMoveTimeGoal CDATA #IMPLIED
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106 |
+
appleExerciseTime CDATA #IMPLIED
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107 |
+
appleExerciseTimeGoal CDATA #IMPLIED
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108 |
+
appleStandHours CDATA #IMPLIED
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109 |
+
appleStandHoursGoal CDATA #IMPLIED
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110 |
+
>
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111 |
+
<!ELEMENT MetadataEntry EMPTY>
|
112 |
+
<!ATTLIST MetadataEntry
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113 |
+
key CDATA #REQUIRED
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114 |
+
value CDATA #REQUIRED
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115 |
+
>
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116 |
+
<!-- Note: Heart Rate Variability records captured by Apple Watch may include an associated list of instantaneous beats-per-minute readings. -->
|
117 |
+
<!ELEMENT HeartRateVariabilityMetadataList (InstantaneousBeatsPerMinute*)>
|
118 |
+
<!ELEMENT InstantaneousBeatsPerMinute EMPTY>
|
119 |
+
<!ATTLIST InstantaneousBeatsPerMinute
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120 |
+
bpm CDATA #REQUIRED
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121 |
+
time CDATA #REQUIRED
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122 |
+
>
|
123 |
+
<!ELEMENT ClinicalRecord EMPTY>
|
124 |
+
<!ATTLIST ClinicalRecord
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125 |
+
type CDATA #REQUIRED
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126 |
+
identifier CDATA #REQUIRED
|
127 |
+
sourceName CDATA #REQUIRED
|
128 |
+
sourceURL CDATA #REQUIRED
|
129 |
+
fhirVersion CDATA #REQUIRED
|
130 |
+
receivedDate CDATA #REQUIRED
|
131 |
+
resourceFilePath CDATA #REQUIRED
|
132 |
+
>
|
133 |
+
<!ELEMENT Audiogram ((MetadataEntry|SensitivityPoint)*)>
|
134 |
+
<!ATTLIST Audiogram
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135 |
+
type CDATA #REQUIRED
|
136 |
+
sourceName CDATA #REQUIRED
|
137 |
+
sourceVersion CDATA #IMPLIED
|
138 |
+
device CDATA #IMPLIED
|
139 |
+
creationDate CDATA #IMPLIED
|
140 |
+
startDate CDATA #REQUIRED
|
141 |
+
endDate CDATA #REQUIRED
|
142 |
+
>
|
143 |
+
<!ELEMENT SensitivityPoint EMPTY>
|
144 |
+
<!ATTLIST SensitivityPoint
|
145 |
+
frequencyValue CDATA #REQUIRED
|
146 |
+
frequencyUnit CDATA #REQUIRED
|
147 |
+
leftEarValue CDATA #IMPLIED
|
148 |
+
leftEarUnit CDATA #IMPLIED
|
149 |
+
leftEarMasked CDATA #IMPLIED
|
150 |
+
leftEarClampingRangeLowerBound CDATA #IMPLIED
|
151 |
+
leftEarClampingRangeUpperBound CDATA #IMPLIED
|
152 |
+
rightEarValue CDATA #IMPLIED
|
153 |
+
rightEarUnit CDATA #IMPLIED
|
154 |
+
rightEarMasked CDATA #IMPLIED
|
155 |
+
rightEarClampingRangeLowerBound CDATA #IMPLIED
|
156 |
+
rightEarClampingRangeUpperBound CDATA #IMPLIED
|
157 |
+
>
|
158 |
+
<!ELEMENT VisionPrescription ((RightEye|LeftEye|Attachment|MetadataEntry)*)>
|
159 |
+
<!ATTLIST VisionPrescription
|
160 |
+
type CDATA #REQUIRED
|
161 |
+
dateIssued CDATA #REQUIRED
|
162 |
+
expirationDate CDATA #IMPLIED
|
163 |
+
brand CDATA #IMPLIED
|
164 |
+
>
|
165 |
+
<!ELEMENT RightEye EMPTY>
|
166 |
+
<!ATTLIST RightEye
|
167 |
+
sphere CDATA #IMPLIED
|
168 |
+
sphereUnit CDATA #IMPLIED
|
169 |
+
cylinder CDATA #IMPLIED
|
170 |
+
cylinderUnit CDATA #IMPLIED
|
171 |
+
axis CDATA #IMPLIED
|
172 |
+
axisUnit CDATA #IMPLIED
|
173 |
+
add CDATA #IMPLIED
|
174 |
+
addUnit CDATA #IMPLIED
|
175 |
+
vertex CDATA #IMPLIED
|
176 |
+
vertexUnit CDATA #IMPLIED
|
177 |
+
prismAmount CDATA #IMPLIED
|
178 |
+
prismAmountUnit CDATA #IMPLIED
|
179 |
+
prismAngle CDATA #IMPLIED
|
180 |
+
prismAngleUnit CDATA #IMPLIED
|
181 |
+
farPD CDATA #IMPLIED
|
182 |
+
farPDUnit CDATA #IMPLIED
|
183 |
+
nearPD CDATA #IMPLIED
|
184 |
+
nearPDUnit CDATA #IMPLIED
|
185 |
+
baseCurve CDATA #IMPLIED
|
186 |
+
baseCurveUnit CDATA #IMPLIED
|
187 |
+
diameter CDATA #IMPLIED
|
188 |
+
diameterUnit CDATA #IMPLIED
|
189 |
+
>
|
190 |
+
<!ELEMENT LeftEye EMPTY>
|
191 |
+
<!ATTLIST LeftEye
|
192 |
+
sphere CDATA #IMPLIED
|
193 |
+
sphereUnit CDATA #IMPLIED
|
194 |
+
cylinder CDATA #IMPLIED
|
195 |
+
cylinderUnit CDATA #IMPLIED
|
196 |
+
axis CDATA #IMPLIED
|
197 |
+
axisUnit CDATA #IMPLIED
|
198 |
+
add CDATA #IMPLIED
|
199 |
+
addUnit CDATA #IMPLIED
|
200 |
+
vertex CDATA #IMPLIED
|
201 |
+
vertexUnit CDATA #IMPLIED
|
202 |
+
prismAmount CDATA #IMPLIED
|
203 |
+
prismAmountUnit CDATA #IMPLIED
|
204 |
+
prismAngle CDATA #IMPLIED
|
205 |
+
prismAngleUnit CDATA #IMPLIED
|
206 |
+
farPD CDATA #IMPLIED
|
207 |
+
farPDUnit CDATA #IMPLIED
|
208 |
+
nearPD CDATA #IMPLIED
|
209 |
+
nearPDUnit CDATA #IMPLIED
|
210 |
+
baseCurve CDATA #IMPLIED
|
211 |
+
baseCurveUnit CDATA #IMPLIED
|
212 |
+
diameter CDATA #IMPLIED
|
213 |
+
diameterUnit CDATA #IMPLIED
|
214 |
+
>
|
215 |
+
<!ELEMENT Attachment EMPTY>
|
216 |
+
<!ATTLIST Attachment
|
217 |
+
identifier CDATA #IMPLIED
|
218 |
+
>
|
219 |
+
]>
|
220 |
+
<HealthData locale="en_US">
|
221 |
+
<ExportDate value="2025-01-14 12:00:00 +0100"/>
|
222 |
+
<Me HKCharacteristicTypeIdentifierDateOfBirth="1995-01-15" HKCharacteristicTypeIdentifierBiologicalSex="HKBiologicalSexMale" HKCharacteristicTypeIdentifierBloodType="HKBloodTypeNotSet" HKCharacteristicTypeIdentifierFitzpatrickSkinType="HKFitzpatrickSkinTypeNotSet" HKCharacteristicTypeIdentifierCardioFitnessMedicationsUse="None"/>
|
223 |
+
|
224 |
+
<!-- Blood Glucose Records -->
|
225 |
+
<Record type="HKQuantityTypeIdentifierBloodGlucose" sourceName="Health" sourceVersion="17.3" unit="mmol<180.1558800000541>/L" creationDate="2024-01-09 22:32:54 +0100" startDate="2024-01-09 12:30:00 +0100" endDate="2024-01-09 12:30:00 +0100" value="4.59">
|
226 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
227 |
+
<MetadataEntry key="HKBloodGlucoseMealTime" value="1"/>
|
228 |
+
</Record>
|
229 |
+
<Record type="HKQuantityTypeIdentifierBloodGlucose" sourceName="Health" sourceVersion="17.3" unit="mmol<180.1558800000541>/L" creationDate="2024-01-09 22:45:00 +0100" startDate="2024-01-09 18:30:00 +0100" endDate="2024-01-09 18:30:00 +0100" value="5.23">
|
230 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
231 |
+
<MetadataEntry key="HKBloodGlucoseMealTime" value="2"/>
|
232 |
+
</Record>
|
233 |
+
|
234 |
+
<!-- Body Mass Index Records -->
|
235 |
+
<Record type="HKQuantityTypeIdentifierBodyMassIndex" sourceName="Zepp Life" sourceVersion="202311211629" unit="count" creationDate="2023-12-03 22:41:05 +0100" startDate="2023-12-03 22:38:45 +0100" endDate="2023-12-03 22:38:45 +0100" value="21.3294"/>
|
236 |
+
<Record type="HKQuantityTypeIdentifierBodyMassIndex" sourceName="Zepp Life" sourceVersion="202311211629" unit="count" creationDate="2023-12-04 08:50:30 +0100" startDate="2023-12-04 01:07:25 +0100" endDate="2023-12-04 01:07:25 +0100" value="22.4251"/>
|
237 |
+
|
238 |
+
<!-- Body Mass Records -->
|
239 |
+
<Record type="HKQuantityTypeIdentifierBodyMass" sourceName="Zepp Life" sourceVersion="202311211629" unit="kg" creationDate="2023-12-03 22:41:05 +0100" startDate="2023-12-03 22:38:45 +0100" endDate="2023-12-03 22:38:45 +0100" value="68.5"/>
|
240 |
+
<Record type="HKQuantityTypeIdentifierBodyMass" sourceName="Zepp Life" sourceVersion="202311211629" unit="kg" creationDate="2023-12-04 08:50:30 +0100" startDate="2023-12-04 01:07:25 +0100" endDate="2023-12-04 01:07:25 +0100" value="72"/>
|
241 |
+
|
242 |
+
<!-- Heart Rate Records -->
|
243 |
+
<Record type="HKQuantityTypeIdentifierHeartRate" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="count/min" creationDate="2023-11-20 19:26:08 +0100" startDate="2023-11-20 19:20:56 +0100" endDate="2023-11-20 19:20:56 +0100" value="56">
|
244 |
+
<MetadataEntry key="HKMetadataKeyHeartRateMotionContext" value="0"/>
|
245 |
+
</Record>
|
246 |
+
<Record type="HKQuantityTypeIdentifierHeartRate" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="count/min" creationDate="2023-11-20 19:42:40 +0100" startDate="2023-11-20 19:42:39 +0100" endDate="2023-11-20 19:42:39 +0100" value="96">
|
247 |
+
<MetadataEntry key="HKMetadataKeyHeartRateMotionContext" value="1"/>
|
248 |
+
</Record>
|
249 |
+
<Record type="HKQuantityTypeIdentifierHeartRate" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="count/min" creationDate="2023-11-20 19:59:33 +0100" startDate="2023-11-20 19:59:19 +0100" endDate="2023-11-20 19:59:19 +0100" value="150">
|
250 |
+
<MetadataEntry key="HKMetadataKeyHeartRateMotionContext" value="2"/>
|
251 |
+
</Record>
|
252 |
+
|
253 |
+
<!-- Step Count Records -->
|
254 |
+
<Record type="HKQuantityTypeIdentifierStepCount" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="count" creationDate="2023-11-20 14:15:00 +0100" startDate="2023-11-20 14:00:00 +0100" endDate="2023-11-20 14:15:00 +0100" value="234"/>
|
255 |
+
<Record type="HKQuantityTypeIdentifierStepCount" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="count" creationDate="2023-11-20 14:30:00 +0100" startDate="2023-11-20 14:15:00 +0100" endDate="2023-11-20 14:30:00 +0100" value="456"/>
|
256 |
+
|
257 |
+
<!-- Blood Pressure Correlation -->
|
258 |
+
<Correlation type="HKCorrelationTypeIdentifierBloodPressure" sourceName="Health" sourceVersion="17.3" creationDate="2024-01-10 12:52:42 +0100" startDate="2024-01-10 11:30:00 +0100" endDate="2024-01-10 11:30:00 +0100">
|
259 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
260 |
+
<Record type="HKQuantityTypeIdentifierBloodPressureSystolic" sourceName="Health" sourceVersion="17.3" unit="mmHg" creationDate="2024-01-10 12:52:42 +0100" startDate="2024-01-10 11:30:00 +0100" endDate="2024-01-10 11:30:00 +0100" value="136">
|
261 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
262 |
+
</Record>
|
263 |
+
<Record type="HKQuantityTypeIdentifierBloodPressureDiastolic" sourceName="Health" sourceVersion="17.3" unit="mmHg" creationDate="2024-01-10 12:52:42 +0100" startDate="2024-01-10 11:30:00 +0100" endDate="2024-01-10 11:30:00 +0100" value="69">
|
264 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
265 |
+
</Record>
|
266 |
+
</Correlation>
|
267 |
+
|
268 |
+
<!-- Sleep Analysis Records -->
|
269 |
+
<Record type="HKCategoryTypeIdentifierSleepAnalysis" sourceName="AutoSleep" sourceVersion="6.4.0" creationDate="2020-07-08 08:37:42 +0100" startDate="2020-07-08 01:05:06 +0100" endDate="2020-07-08 08:30:00 +0100" value="HKCategoryValueSleepAnalysisInBed">
|
270 |
+
<MetadataEntry key="HKTimeZone" value="Europe/Zurich"/>
|
271 |
+
</Record>
|
272 |
+
<Record type="HKCategoryTypeIdentifierSleepAnalysis" sourceName="AutoSleep" sourceVersion="6.4.0" creationDate="2020-07-08 08:37:42 +0100" startDate="2020-07-08 01:15:00 +0100" endDate="2020-07-08 08:30:00 +0100" value="HKCategoryValueSleepAnalysisAsleepUnspecified"/>
|
273 |
+
|
274 |
+
<!-- Workout Records -->
|
275 |
+
<Workout workoutActivityType="HKWorkoutActivityTypeWalking" duration="88.23378186623255" durationUnit="min" totalDistance="5.234" totalDistanceUnit="km" totalEnergyBurned="342.5" totalEnergyBurnedUnit="Cal" sourceName="Guillaume's Apple Watch" sourceVersion="6.2.5" device="<<HKDevice: 0x533b03430>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:6.2.5>" creationDate="2020-05-27 18:57:19 +0100" startDate="2020-05-27 17:26:15 +0100" endDate="2020-05-27 18:57:18 +0100">
|
276 |
+
<MetadataEntry key="HKIndoorWorkout" value="0"/>
|
277 |
+
<MetadataEntry key="HKAverageMETs" value="5.43210 kcal/hr·kg"/>
|
278 |
+
<WorkoutEvent type="HKWorkoutEventTypePause" date="2020-05-27 17:45:00 +0100"/>
|
279 |
+
<WorkoutEvent type="HKWorkoutEventTypeResume" date="2020-05-27 17:47:30 +0100"/>
|
280 |
+
<WorkoutStatistics type="HKQuantityTypeIdentifierHeartRate" startDate="2020-05-27 17:26:15 +0100" endDate="2020-05-27 18:57:18 +0100" average="92.5" minimum="65" maximum="125" unit="count/min"/>
|
281 |
+
<WorkoutStatistics type="HKQuantityTypeIdentifierActiveEnergyBurned" startDate="2020-05-27 17:26:15 +0100" endDate="2020-05-27 18:57:18 +0100" sum="342.5" unit="Cal"/>
|
282 |
+
<WorkoutRoute sourceName="Guillaume's Apple Watch" sourceVersion="11.2" creationDate="2024-12-13 13:17:22 +0200" startDate="2024-12-13 12:58:33 +0200" endDate="2024-12-13 12:59:02 +0200">
|
283 |
+
<MetadataEntry key="HKMetadataKeySyncVersion" value="2"/>
|
284 |
+
<MetadataEntry key="HKMetadataKeySyncIdentifier" value="48F229FA-1BC6-47E6-91BE-BBA6796D5E8C"/>
|
285 |
+
<FileReference path="/workout-routes/route_2024-12-13_11.59am.gpx"/>
|
286 |
+
</WorkoutRoute>
|
287 |
+
<WorkoutRoute sourceName="Guillaume's Apple Watch" sourceVersion="11.2" creationDate="2024-12-13 13:17:22 +0200" startDate="2024-12-13 12:58:33 +0200" endDate="2024-12-13 12:59:02 +0200">
|
288 |
+
<MetadataEntry key="HKMetadataKeySyncVersion" value="2"/>
|
289 |
+
<MetadataEntry key="HKMetadataKeySyncIdentifier" value="48F229FA-1BC6-47E6-91BE-BBA6796D5E8C"/>
|
290 |
+
<FileReference path="/workout-routes/route_2024-12-13_11.59am.gpx"/>
|
291 |
+
</WorkoutRoute>
|
292 |
+
</Workout>
|
293 |
+
|
294 |
+
<Workout workoutActivityType="HKWorkoutActivityTypeCycling" duration="28.81272718310356" durationUnit="min" totalDistance="12.5" totalDistanceUnit="km" totalEnergyBurned="289.3" totalEnergyBurnedUnit="Cal" sourceName="Guillaume's Apple Watch" sourceVersion="6.2.5" device="<<HKDevice: 0x533b03430>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:6.2.5>" creationDate="2020-05-28 15:24:12 +0100" startDate="2020-05-28 14:55:22 +0100" endDate="2020-05-28 15:24:11 +0100">
|
295 |
+
<MetadataEntry key="HKIndoorWorkout" value="0"/>
|
296 |
+
<WorkoutStatistics type="HKQuantityTypeIdentifierHeartRate" startDate="2020-05-28 14:55:22 +0100" endDate="2020-05-28 15:24:11 +0100" average="115.2" minimum="88" maximum="145" unit="count/min"/>
|
297 |
+
</Workout>
|
298 |
+
|
299 |
+
<!-- Activity Summary Records -->
|
300 |
+
<ActivitySummary dateComponents="2020-05-27" activeEnergyBurned="547.163" activeEnergyBurnedGoal="680" activeEnergyBurnedUnit="Cal" appleMoveTime="0" appleMoveTimeGoal="0" appleExerciseTime="44" appleExerciseTimeGoal="30" appleStandHours="10" appleStandHoursGoal="12"/>
|
301 |
+
<ActivitySummary dateComponents="2020-05-28" activeEnergyBurned="732.037" activeEnergyBurnedGoal="680" activeEnergyBurnedUnit="Cal" appleMoveTime="0" appleMoveTimeGoal="0" appleExerciseTime="55" appleExerciseTimeGoal="30" appleStandHours="14" appleStandHoursGoal="12"/>
|
302 |
+
<ActivitySummary dateComponents="2020-05-29" activeEnergyBurned="824.261" activeEnergyBurnedGoal="680" activeEnergyBurnedUnit="Cal" appleMoveTime="0" appleMoveTimeGoal="0" appleExerciseTime="53" appleExerciseTimeGoal="30" appleStandHours="15" appleStandHoursGoal="12"/>
|
303 |
+
|
304 |
+
<!-- Additional diverse records -->
|
305 |
+
<Record type="HKQuantityTypeIdentifierActiveEnergyBurned" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="Cal" creationDate="2023-11-20 14:30:00 +0100" startDate="2023-11-20 14:00:00 +0100" endDate="2023-11-20 14:30:00 +0100" value="45.3"/>
|
306 |
+
|
307 |
+
<Record type="HKQuantityTypeIdentifierBasalEnergyBurned" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="Cal" creationDate="2023-11-20 15:00:00 +0100" startDate="2023-11-20 14:00:00 +0100" endDate="2023-11-20 15:00:00 +0100" value="85.7"/>
|
308 |
+
|
309 |
+
<Record type="HKQuantityTypeIdentifierDistanceWalkingRunning" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="km" creationDate="2023-11-20 14:30:00 +0100" startDate="2023-11-20 14:00:00 +0100" endDate="2023-11-20 14:30:00 +0100" value="0.523"/>
|
310 |
+
|
311 |
+
<Record type="HKCategoryTypeIdentifierAppleStandHour" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" creationDate="2023-11-20 15:00:00 +0100" startDate="2023-11-20 14:00:00 +0100" endDate="2023-11-20 15:00:00 +0100" value="HKCategoryValueAppleStandHourStood"/>
|
312 |
+
|
313 |
+
<Record type="HKCategoryTypeIdentifierMindfulSession" sourceName="Breathe" sourceVersion="1.0" creationDate="2023-11-20 16:00:00 +0100" startDate="2023-11-20 15:55:00 +0100" endDate="2023-11-20 16:00:00 +0100" value="HKCategoryValueNotApplicable"/>
|
314 |
+
|
315 |
+
<Record type="HKQuantityTypeIdentifierBodyFatPercentage" sourceName="Health" sourceVersion="17.3" unit="%" creationDate="2024-01-10 09:00:00 +0100" startDate="2024-01-10 09:00:00 +0100" endDate="2024-01-10 09:00:00 +0100" value="18.5">
|
316 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
317 |
+
</Record>
|
318 |
+
|
319 |
+
<Record type="HKQuantityTypeIdentifierHeight" sourceName="Health" sourceVersion="17.3" unit="cm" creationDate="2023-12-01 10:00:00 +0100" startDate="2023-12-01 10:00:00 +0100" endDate="2023-12-01 10:00:00 +0100" value="180">
|
320 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
321 |
+
</Record>
|
322 |
+
|
323 |
+
<Record type="HKQuantityTypeIdentifierRestingHeartRate" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="count/min" creationDate="2023-11-21 07:00:00 +0100" startDate="2023-11-20 00:00:00 +0100" endDate="2023-11-21 00:00:00 +0100" value="52"/>
|
324 |
+
|
325 |
+
<Record type="HKQuantityTypeIdentifierVO2Max" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="mL/kg·min" creationDate="2023-11-20 18:00:00 +0100" startDate="2023-11-20 17:26:15 +0100" endDate="2023-11-20 18:00:00 +0100" value="45.2">
|
326 |
+
<MetadataEntry key="HKVO2MaxTestType" value="2"/>
|
327 |
+
</Record>
|
328 |
+
|
329 |
+
<Record type="HKQuantityTypeIdentifierAppleSleepingWristTemperature" sourceName="Guillaume's Apple Watch" sourceVersion="10.0" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch6,2, software:10.0>" unit="degC" creationDate="2023-11-21 07:30:00 +0100" startDate="2023-11-21 01:00:00 +0100" endDate="2023-11-21 07:00:00 +0100" value="0.23">
|
330 |
+
<MetadataEntry key="HKSleepingWristTemperatureSourceType" value="0"/>
|
331 |
+
</Record>
|
332 |
+
|
333 |
+
<Record type="HKQuantityTypeIdentifierHeartRateVariabilitySDNN" sourceName="Guillaume's Apple Watch" sourceVersion="9.6.3" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch4,4, software:9.6.3>" unit="ms" creationDate="2023-11-20 08:00:00 +0100" startDate="2023-11-20 07:55:00 +0100" endDate="2023-11-20 08:00:00 +0100" value="45.3">
|
334 |
+
<HeartRateVariabilityMetadataList>
|
335 |
+
<InstantaneousBeatsPerMinute bpm="72" time="7:47:41.86 PM"/>
|
336 |
+
<InstantaneousBeatsPerMinute bpm="68" time="7:47:53.78 PM"/>
|
337 |
+
</HeartRateVariabilityMetadataList>
|
338 |
+
</Record>
|
339 |
+
|
340 |
+
<Record type="HKQuantityTypeIdentifierOxygenSaturation" sourceName="Health" sourceVersion="17.3" unit="%" creationDate="2024-01-10 10:00:00 +0100" startDate="2024-01-10 10:00:00 +0100" endDate="2024-01-10 10:00:00 +0100" value="98">
|
341 |
+
<MetadataEntry key="HKWasUserEntered" value="1"/>
|
342 |
+
</Record>
|
343 |
+
|
344 |
+
<Record type="HKQuantityTypeIdentifierRespiratoryRate" sourceName="Guillaume's Apple Watch" sourceVersion="10.0" device="<<HKDevice: 0x533ad2350>, name:Apple Watch, manufacturer:Apple Inc., model:Watch, hardware:Watch6,2, software:10.0>" unit="count/min" creationDate="2023-11-21 07:00:00 +0100" startDate="2023-11-21 01:00:00 +0100" endDate="2023-11-21 07:00:00 +0100" value="14.5"/>
|
345 |
+
|
346 |
+
</HealthData>
|
mcp_server.py
ADDED
@@ -0,0 +1,182 @@
|
|
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|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
import gradio as gr
|
2 |
+
import sqlite3
|
3 |
+
import pandas as pd
|
4 |
+
import json
|
5 |
+
import os
|
6 |
+
from huggingface_hub import hf_hub_download
|
7 |
+
|
8 |
+
# Configuration
|
9 |
+
LOCAL_DB_PATH = "data/health_data.db"
|
10 |
+
DATA_REPO = os.getenv("DATA_REPO", None) # e.g., "username/project-data"
|
11 |
+
IS_HF_SPACE = os.getenv("SPACE_ID") is not None
|
12 |
+
|
13 |
+
def get_db_connection(token=None):
|
14 |
+
"""Get a connection to the SQLite database."""
|
15 |
+
if DATA_REPO and IS_HF_SPACE:
|
16 |
+
# Running in HF Spaces - download from private dataset
|
17 |
+
try:
|
18 |
+
db_path = hf_hub_download(
|
19 |
+
repo_id=DATA_REPO,
|
20 |
+
filename="health_data.db",
|
21 |
+
repo_type="dataset",
|
22 |
+
token=token
|
23 |
+
)
|
24 |
+
return sqlite3.connect(db_path)
|
25 |
+
except Exception as e:
|
26 |
+
raise Exception(f"Failed to download database from {DATA_REPO}: {str(e)}")
|
27 |
+
else:
|
28 |
+
# Local development mode
|
29 |
+
if not os.path.exists(LOCAL_DB_PATH):
|
30 |
+
raise FileNotFoundError(f"Database file not found: {LOCAL_DB_PATH}. Run create_test_db.py first.")
|
31 |
+
return sqlite3.connect(LOCAL_DB_PATH)
|
32 |
+
|
33 |
+
def execute_sql_query(sql_query, hf_token=None):
|
34 |
+
"""Execute any SQL query on the Apple Health SQLite database.
|
35 |
+
|
36 |
+
Args:
|
37 |
+
sql_query (str): The SQL query to execute
|
38 |
+
hf_token (str): Hugging Face token for accessing private dataset
|
39 |
+
|
40 |
+
Returns:
|
41 |
+
str: JSON formatted results or error message
|
42 |
+
"""
|
43 |
+
if not sql_query or not sql_query.strip():
|
44 |
+
return "Error: Empty SQL query provided"
|
45 |
+
|
46 |
+
try:
|
47 |
+
conn = get_db_connection(token=hf_token)
|
48 |
+
|
49 |
+
# Execute the query
|
50 |
+
result = pd.read_sql_query(sql_query, conn)
|
51 |
+
conn.close()
|
52 |
+
|
53 |
+
# Convert to JSON
|
54 |
+
return json.dumps(result.to_dict('records'), indent=2)
|
55 |
+
|
56 |
+
except Exception as e:
|
57 |
+
return f"Error executing SQL query: {str(e)}"
|
58 |
+
|
59 |
+
# MCP Server Interface
|
60 |
+
with gr.Blocks(title="Apple Health MCP Server") as demo:
|
61 |
+
if IS_HF_SPACE and DATA_REPO:
|
62 |
+
gr.Markdown("# Apple Health MCP Server")
|
63 |
+
gr.Markdown(f"This is an MCP server for querying Apple Health data from dataset: `{DATA_REPO}`")
|
64 |
+
else:
|
65 |
+
gr.Markdown("# Apple Health MCP Server (Local Development)")
|
66 |
+
gr.Markdown(f"Database: `{LOCAL_DB_PATH}`")
|
67 |
+
|
68 |
+
with gr.Tab("SQL Query Interface"):
|
69 |
+
gr.Markdown("### Execute SQL Queries")
|
70 |
+
gr.Markdown("Enter any SQL query to execute against your Apple Health SQLite database.")
|
71 |
+
|
72 |
+
# Only show token input if running in HF Spaces
|
73 |
+
if IS_HF_SPACE and DATA_REPO:
|
74 |
+
hf_token_input = gr.Textbox(
|
75 |
+
label="Hugging Face Token",
|
76 |
+
placeholder="hf_...",
|
77 |
+
type="password",
|
78 |
+
info="Your HF token to access the private dataset. Get it from https://huggingface.co/settings/tokens"
|
79 |
+
)
|
80 |
+
else:
|
81 |
+
hf_token_input = gr.Textbox(visible=False, value=None)
|
82 |
+
|
83 |
+
sql_input = gr.Textbox(
|
84 |
+
label="SQL Query",
|
85 |
+
placeholder="SELECT * FROM activity_summaries LIMIT 10;",
|
86 |
+
lines=5,
|
87 |
+
value="SELECT name FROM sqlite_master WHERE type='table';",
|
88 |
+
info="Available tables depend on your export data. Run the first sample query to see all tables."
|
89 |
+
)
|
90 |
+
|
91 |
+
query_btn = gr.Button("Execute Query", variant="primary")
|
92 |
+
output = gr.Code(language="json", label="Query Results")
|
93 |
+
|
94 |
+
# Sample queries for easy testing
|
95 |
+
gr.Markdown("### Sample Queries")
|
96 |
+
gr.Examples(
|
97 |
+
examples=[
|
98 |
+
["SELECT name FROM sqlite_master WHERE type='table';"],
|
99 |
+
["SELECT * FROM workout LIMIT 5;"],
|
100 |
+
["SELECT * FROM instantaneousbeatsperminute;"],
|
101 |
+
],
|
102 |
+
inputs=sql_input
|
103 |
+
)
|
104 |
+
|
105 |
+
query_btn.click(
|
106 |
+
fn=execute_sql_query,
|
107 |
+
inputs=[sql_input, hf_token_input],
|
108 |
+
outputs=output
|
109 |
+
)
|
110 |
+
|
111 |
+
with gr.Tab("MCP Endpoint"):
|
112 |
+
if IS_HF_SPACE:
|
113 |
+
space_id = os.getenv("SPACE_ID", "your-space-id")
|
114 |
+
gr.Markdown(f"""
|
115 |
+
## MCP Server Endpoint
|
116 |
+
|
117 |
+
This space can be used as an MCP server with the following configuration:
|
118 |
+
|
119 |
+
```json
|
120 |
+
{{
|
121 |
+
"mcpServers": {{
|
122 |
+
"apple-health": {{
|
123 |
+
"command": "npx",
|
124 |
+
"args": [
|
125 |
+
"mcp-remote",
|
126 |
+
"https://huggingface.co/spaces/{space_id}/gradio_api/mcp/sse",
|
127 |
+
"--header",
|
128 |
+
"Authorization:${{AUTH_HEADER}}"
|
129 |
+
],
|
130 |
+
"env": {{
|
131 |
+
"AUTH_HEADER": "Bearer YOUR_HF_TOKEN_HERE"
|
132 |
+
}}
|
133 |
+
}}
|
134 |
+
}}
|
135 |
+
}}
|
136 |
+
```
|
137 |
+
|
138 |
+
**Setup Instructions:**
|
139 |
+
1. Replace `YOUR_HF_TOKEN_HERE` with your actual Hugging Face token
|
140 |
+
2. Add this configuration to your Claude Desktop config file
|
141 |
+
3. Claude will be able to query your Apple Health data using SQL
|
142 |
+
""")
|
143 |
+
else:
|
144 |
+
gr.Markdown("""
|
145 |
+
## MCP Server Endpoint
|
146 |
+
|
147 |
+
This local server can be used as an MCP server with the following configuration:
|
148 |
+
|
149 |
+
```json
|
150 |
+
{
|
151 |
+
"mcpServers": {
|
152 |
+
"apple-health-local": {
|
153 |
+
"command": "npx",
|
154 |
+
"args": [
|
155 |
+
"mcp-remote",
|
156 |
+
"http://localhost:7860/gradio_api/mcp/sse"
|
157 |
+
]
|
158 |
+
}
|
159 |
+
}
|
160 |
+
}
|
161 |
+
```
|
162 |
+
|
163 |
+
**Setup Instructions:**
|
164 |
+
1. Run this server: `python mcp_server.py`
|
165 |
+
2. Add the above configuration to your Claude Desktop config file
|
166 |
+
3. Claude will be able to query your Apple Health data using SQL
|
167 |
+
|
168 |
+
**Note:** This is a local development server. No authentication is required.
|
169 |
+
""")
|
170 |
+
|
171 |
+
if __name__ == "__main__":
|
172 |
+
if IS_HF_SPACE:
|
173 |
+
print(f"Starting Apple Health MCP Server in HF Spaces mode")
|
174 |
+
if DATA_REPO:
|
175 |
+
print(f"Data repository: {DATA_REPO}")
|
176 |
+
else:
|
177 |
+
print("Warning: DATA_REPO environment variable not set")
|
178 |
+
else:
|
179 |
+
print(f"Starting Apple Health MCP Server (Local Development)")
|
180 |
+
print(f"Database path: {LOCAL_DB_PATH}")
|
181 |
+
|
182 |
+
demo.launch(mcp_server=True, server_name="0.0.0.0" if not IS_HF_SPACE else None)
|