roni commited on
Commit
626d43b
·
1 Parent(s): 3380f3c

using shorter organism name

Browse files
Files changed (1) hide show
  1. protein_viz.py +1 -1
protein_viz.py CHANGED
@@ -63,7 +63,7 @@ def get_gene_name_from_polymer_entity(pdb_id, entity_id):
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  try:
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  source_organism = res_data["rcsb_entity_source_organism"][0]
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  gene_name = source_organism["rcsb_gene_name"][0]["value"]
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- species = source_organism["ncbi_scientific_name"]
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  return gene_name, species
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  except KeyError:
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  pass
 
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  try:
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  source_organism = res_data["rcsb_entity_source_organism"][0]
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  gene_name = source_organism["rcsb_gene_name"][0]["value"]
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+ species = source_organism["scientific_name"]
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  return gene_name, species
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  except KeyError:
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  pass