sample_id
stringlengths
23
23
population
stringclasses
7 values
region
stringclasses
5 values
is_SSA
bool
2 classes
is_reference_panel
bool
2 classes
sex
stringclasses
2 values
age
int64
18
90
diet_pattern
stringclasses
3 values
enterotype
stringclasses
3 values
shannon_index
float64
1.98
5.43
observed_richness
int64
43
306
rel_abundance_Bacteroides
float64
0
0.76
rel_abundance_Prevotella
float64
0
0.78
rel_abundance_Faecalibacterium
float64
0.05
0.38
rel_abundance_Ruminococcus
float64
0.05
0.49
functional_SCFA_potential
float64
1.22
5
functional_Bile_acid_potential
float64
0.87
5
functional_Mucin_deg_potential
float64
1.26
4.95
MICROBIOME_SAMPLE_09901
EAS
Non_SSA
false
true
Female
61
Mixed_transition
Bacteroides
2.875
118
0.5812
0.0664
0.1493
0.2031
2.339109
2.607738
2.945737
MICROBIOME_SAMPLE_09902
EAS
Non_SSA
false
true
Female
72
High_fiber_plant_rich
Bacteroides
3.025
156
0.6709
0.0687
0.1094
0.1511
2.130329
3.926707
3.412513
MICROBIOME_SAMPLE_09903
EAS
Non_SSA
false
true
Female
69
Westernized_high_fat_sugar
Bacteroides
3.364
206
0.6125
0.09
0.1544
0.1431
1.773982
3.970106
2.930266
MICROBIOME_SAMPLE_09904
EAS
Non_SSA
false
true
Female
26
High_fiber_plant_rich
Prevotella
3.009
140
0.0986
0.5773
0.1537
0.1703
3.95565
2.493345
2.807676
MICROBIOME_SAMPLE_09905
EAS
Non_SSA
false
true
Female
47
Westernized_high_fat_sugar
Bacteroides
3.032
182
0.6241
0.0752
0.135
0.1657
2.308657
2.740412
2.194205
MICROBIOME_SAMPLE_09906
EAS
Non_SSA
false
true
Female
55
Mixed_transition
Bacteroides
3.905
108
0.6429
0.0791
0.1212
0.1568
2.142897
3.815369
2.602348
MICROBIOME_SAMPLE_09907
EAS
Non_SSA
false
true
Female
45
Westernized_high_fat_sugar
Bacteroides
2.63
198
0.6498
0.0589
0.1476
0.1437
2.966739
3.611176
2.001922
MICROBIOME_SAMPLE_09908
EAS
Non_SSA
false
true
Female
18
Mixed_transition
Prevotella
3.305
195
0.0327
0.6658
0.1745
0.1269
4.41773
2.776234
3.162896
MICROBIOME_SAMPLE_09909
EAS
Non_SSA
false
true
Female
48
Westernized_high_fat_sugar
Bacteroides
3.135
226
0.5761
0.076
0.1449
0.2029
2.844399
4.079325
2.842601
MICROBIOME_SAMPLE_09910
EAS
Non_SSA
false
true
Female
56
Mixed_transition
Ruminococcus_like
4.158
199
0.1723
0.151
0.2752
0.4015
3.370289
2.802582
3.403681
MICROBIOME_SAMPLE_09911
EAS
Non_SSA
false
true
Female
50
High_fiber_plant_rich
Bacteroides
3.014
159
0.6378
0.045
0.1372
0.1801
2.735243
4.063738
3.107389
MICROBIOME_SAMPLE_09912
EAS
Non_SSA
false
true
Female
45
Westernized_high_fat_sugar
Bacteroides
4.026
152
0.6174
0.0833
0.1028
0.1966
2.213654
4.152117
2.577995
MICROBIOME_SAMPLE_09913
EAS
Non_SSA
false
true
Female
56
Mixed_transition
Bacteroides
3.665
134
0.5804
0.0808
0.1621
0.1767
1.70734
4.335365
2.517035
MICROBIOME_SAMPLE_09914
EAS
Non_SSA
false
true
Female
60
Mixed_transition
Prevotella
3.722
115
0.0332
0.6411
0.175
0.1506
3.610576
2.904359
2.92963
MICROBIOME_SAMPLE_09915
EAS
Non_SSA
false
true
Female
51
Mixed_transition
Bacteroides
3.395
126
0.6233
0.0485
0.1768
0.1514
2.590343
4.138419
2.163038
MICROBIOME_SAMPLE_09916
EAS
Non_SSA
false
true
Female
71
Westernized_high_fat_sugar
Prevotella
3.282
43
0.0724
0.6293
0.1492
0.1491
3.836351
2.081455
3.120417
MICROBIOME_SAMPLE_09917
EAS
Non_SSA
false
true
Female
57
High_fiber_plant_rich
Ruminococcus_like
3.226
159
0.205
0.1712
0.2929
0.331
3.435804
3.111358
3.471191
MICROBIOME_SAMPLE_09918
EAS
Non_SSA
false
true
Female
46
Westernized_high_fat_sugar
Ruminococcus_like
3.196
110
0.1847
0.1527
0.1833
0.4793
2.950435
3.443469
3.542827
MICROBIOME_SAMPLE_09919
EAS
Non_SSA
false
true
Female
44
Mixed_transition
Bacteroides
4.236
123
0.5951
0.0608
0.1812
0.163
1.811823
3.695124
3.13647
MICROBIOME_SAMPLE_09920
EAS
Non_SSA
false
true
Female
54
High_fiber_plant_rich
Prevotella
3.386
142
0.1024
0.5998
0.1388
0.159
4.118843
2.741891
2.748473
MICROBIOME_SAMPLE_09921
EAS
Non_SSA
false
true
Female
68
Westernized_high_fat_sugar
Bacteroides
3.355
157
0.5962
0.0842
0.1539
0.1657
2.463673
4.084925
2.459309
MICROBIOME_SAMPLE_09922
EAS
Non_SSA
false
true
Female
47
Westernized_high_fat_sugar
Ruminococcus_like
4.119
154
0.1791
0.101
0.281
0.439
3.775881
2.768129
3.230421
MICROBIOME_SAMPLE_09923
EAS
Non_SSA
false
true
Female
63
High_fiber_plant_rich
Prevotella
3.709
190
0.1119
0.6073
0.1346
0.1462
4.359714
2.812999
2.932833
MICROBIOME_SAMPLE_09924
EAS
Non_SSA
false
true
Female
57
Westernized_high_fat_sugar
Ruminococcus_like
3.564
168
0.1418
0.1613
0.3232
0.3737
4.012223
3.326286
4.021445
MICROBIOME_SAMPLE_09925
EAS
Non_SSA
false
true
Female
78
Westernized_high_fat_sugar
Bacteroides
3.589
188
0.6173
0.0431
0.1374
0.2022
2.236251
3.938646
2.510105
MICROBIOME_SAMPLE_09926
EAS
Non_SSA
false
true
Female
60
Westernized_high_fat_sugar
Bacteroides
3.162
110
0.6464
0.1103
0.1086
0.1347
2.279866
3.677027
2.403971
MICROBIOME_SAMPLE_09927
EAS
Non_SSA
false
true
Female
48
Mixed_transition
Prevotella
2.673
167
0.0632
0.6367
0.1291
0.171
3.89244
2.965879
3.515158
MICROBIOME_SAMPLE_09928
EAS
Non_SSA
false
true
Female
64
Westernized_high_fat_sugar
Bacteroides
3.489
162
0.6164
0
0.1764
0.2072
2.765445
4.032648
2.717324
MICROBIOME_SAMPLE_09929
EAS
Non_SSA
false
true
Female
64
Westernized_high_fat_sugar
Ruminococcus_like
3.225
182
0.1658
0.1727
0.3076
0.3538
3.39235
3.376476
2.418334
MICROBIOME_SAMPLE_09930
EAS
Non_SSA
false
true
Female
52
Mixed_transition
Bacteroides
2.816
143
0.6492
0.0485
0.1678
0.1346
2.302977
3.562886
2.912661
MICROBIOME_SAMPLE_09931
EAS
Non_SSA
false
true
Female
43
Westernized_high_fat_sugar
Bacteroides
3.189
170
0.611
0.0706
0.1194
0.199
2.479961
3.775432
2.363579
MICROBIOME_SAMPLE_09932
EAS
Non_SSA
false
true
Female
62
Westernized_high_fat_sugar
Bacteroides
3.548
186
0.5903
0.1051
0.1486
0.156
2.346479
3.025769
2.319337
MICROBIOME_SAMPLE_09933
EAS
Non_SSA
false
true
Female
57
High_fiber_plant_rich
Ruminococcus_like
4.394
182
0.1822
0.1736
0.2651
0.3791
3.208406
2.767109
3.221415
MICROBIOME_SAMPLE_09934
EAS
Non_SSA
false
true
Female
39
Westernized_high_fat_sugar
Ruminococcus_like
3.731
178
0.2094
0.1389
0.3066
0.3451
3.049591
2.624071
2.848256
MICROBIOME_SAMPLE_09935
EAS
Non_SSA
false
true
Female
59
Westernized_high_fat_sugar
Bacteroides
3.211
182
0.6287
0.1005
0.1359
0.135
3.011782
3.195027
1.772897
MICROBIOME_SAMPLE_09936
EAS
Non_SSA
false
true
Female
49
Mixed_transition
Bacteroides
3.378
117
0.542
0.0842
0.2035
0.1702
2.712416
4.164697
3.621414
MICROBIOME_SAMPLE_09937
EAS
Non_SSA
false
true
Female
39
Mixed_transition
Ruminococcus_like
3.863
150
0.1618
0.2008
0.2723
0.3651
3.469023
2.766125
2.80142
MICROBIOME_SAMPLE_09938
EAS
Non_SSA
false
true
Female
52
Westernized_high_fat_sugar
Prevotella
3.566
148
0.0543
0.6658
0.1085
0.1713
4.019285
2.799377
2.911495
MICROBIOME_SAMPLE_09939
EAS
Non_SSA
false
true
Female
70
Westernized_high_fat_sugar
Bacteroides
3.971
166
0.5554
0.081
0.1806
0.183
2.452766
3.568638
2.143207
MICROBIOME_SAMPLE_09940
EAS
Non_SSA
false
true
Female
69
Westernized_high_fat_sugar
Prevotella
4.001
137
0.0788
0.6477
0.1297
0.1438
3.544187
2.697012
3.295446
MICROBIOME_SAMPLE_09941
EAS
Non_SSA
false
true
Female
66
Mixed_transition
Bacteroides
3.753
144
0.5703
0.0676
0.1353
0.2269
2.919044
3.812855
3.070006
MICROBIOME_SAMPLE_09942
EAS
Non_SSA
false
true
Female
59
Mixed_transition
Bacteroides
3.35
131
0.6175
0.1042
0.112
0.1663
2.773644
3.489687
2.607857
MICROBIOME_SAMPLE_09943
EAS
Non_SSA
false
true
Female
63
Westernized_high_fat_sugar
Bacteroides
3.594
177
0.5995
0.1052
0.1273
0.1681
2.463745
3.480288
2.390446
MICROBIOME_SAMPLE_09944
EAS
Non_SSA
false
true
Female
57
Mixed_transition
Bacteroides
2.956
181
0.6564
0.0959
0.1538
0.094
2.467105
3.83593
2.424732
MICROBIOME_SAMPLE_09945
EAS
Non_SSA
false
true
Female
44
Westernized_high_fat_sugar
Prevotella
3.633
133
0.0916
0.6332
0.116
0.1591
4.105512
2.016561
2.966513
MICROBIOME_SAMPLE_09946
EAS
Non_SSA
false
true
Female
46
High_fiber_plant_rich
Ruminococcus_like
3.123
163
0.1349
0.123
0.3084
0.4336
3.46629
2.942637
3.197442
MICROBIOME_SAMPLE_09947
EAS
Non_SSA
false
true
Female
49
High_fiber_plant_rich
Bacteroides
3.963
167
0.6026
0.0909
0.1259
0.1806
2.82615
3.302316
2.168999
MICROBIOME_SAMPLE_09948
EAS
Non_SSA
false
true
Female
71
High_fiber_plant_rich
Ruminococcus_like
3.337
184
0.235
0.1945
0.1995
0.371
3.006212
3.077955
3.971694
MICROBIOME_SAMPLE_09949
EAS
Non_SSA
false
true
Female
68
Westernized_high_fat_sugar
Ruminococcus_like
3.392
110
0.1961
0.2018
0.2299
0.3722
3.604338
3.576563
3.912722
MICROBIOME_SAMPLE_09950
EAS
Non_SSA
false
true
Female
44
Mixed_transition
Ruminococcus_like
2.764
179
0.1906
0.1059
0.3116
0.3919
3.235966
2.679772
3.070252
MICROBIOME_SAMPLE_09951
EAS
Non_SSA
false
true
Female
57
Westernized_high_fat_sugar
Prevotella
3.295
126
0.0373
0.6309
0.1673
0.1645
3.303611
2.400761
2.658582
MICROBIOME_SAMPLE_09952
EAS
Non_SSA
false
true
Female
52
Westernized_high_fat_sugar
Bacteroides
3.028
130
0.6871
0.0232
0.126
0.1636
2.791137
4.021092
1.667449
MICROBIOME_SAMPLE_09953
EAS
Non_SSA
false
true
Female
54
High_fiber_plant_rich
Bacteroides
3.067
119
0.6175
0.1095
0.1329
0.1401
2.226934
4.101637
3.326708
MICROBIOME_SAMPLE_09954
EAS
Non_SSA
false
true
Female
50
High_fiber_plant_rich
Bacteroides
3.359
159
0.5553
0.0259
0.2024
0.2164
2.436508
3.478392
3.062449
MICROBIOME_SAMPLE_09955
EAS
Non_SSA
false
true
Female
71
Westernized_high_fat_sugar
Bacteroides
2.904
107
0.6103
0.0658
0.1472
0.1768
3.05456
3.310744
2.929054
MICROBIOME_SAMPLE_09956
EAS
Non_SSA
false
true
Female
56
Westernized_high_fat_sugar
Bacteroides
3.334
160
0.5776
0.0654
0.1489
0.2081
2.924247
3.878745
1.927932
MICROBIOME_SAMPLE_09957
EAS
Non_SSA
false
true
Female
58
Mixed_transition
Ruminococcus_like
3.941
147
0.1345
0.1544
0.2895
0.4217
3.082433
2.823412
4.081611
MICROBIOME_SAMPLE_09958
EAS
Non_SSA
false
true
Female
58
Westernized_high_fat_sugar
Ruminococcus_like
3.408
142
0.2074
0.16
0.3063
0.3262
2.825809
2.815321
3.192343
MICROBIOME_SAMPLE_09959
EAS
Non_SSA
false
true
Female
45
Westernized_high_fat_sugar
Ruminococcus_like
3.383
166
0.1757
0.1905
0.2645
0.3694
3.043864
4.071057
3.392372
MICROBIOME_SAMPLE_09960
EAS
Non_SSA
false
true
Female
57
Westernized_high_fat_sugar
Bacteroides
2.874
86
0.5873
0.1028
0.1606
0.1493
2.947286
3.61139
1.604458
MICROBIOME_SAMPLE_09961
EAS
Non_SSA
false
true
Female
68
Westernized_high_fat_sugar
Bacteroides
3.592
169
0.6094
0.0806
0.1685
0.1415
2.889338
4.706353
2.679524
MICROBIOME_SAMPLE_09962
EAS
Non_SSA
false
true
Female
72
High_fiber_plant_rich
Bacteroides
3.849
151
0.6165
0.0527
0.176
0.1549
2.277998
3.935754
2.328848
MICROBIOME_SAMPLE_09963
EAS
Non_SSA
false
true
Female
43
Mixed_transition
Bacteroides
3.405
144
0.6554
0.0931
0.0846
0.1668
2.919198
4.145044
2.784077
MICROBIOME_SAMPLE_09964
EAS
Non_SSA
false
true
Female
39
Mixed_transition
Prevotella
3.936
163
0.068
0.6316
0.1378
0.1626
4.314468
2.208817
2.705016
MICROBIOME_SAMPLE_09965
EAS
Non_SSA
false
true
Female
57
Mixed_transition
Bacteroides
4.292
171
0.589
0.0473
0.2012
0.1625
2.479831
3.585471
3.206541
MICROBIOME_SAMPLE_09966
EAS
Non_SSA
false
true
Female
68
Westernized_high_fat_sugar
Ruminococcus_like
3.712
147
0.2233
0.1654
0.2333
0.378
3.530976
2.832953
3.743514
MICROBIOME_SAMPLE_09967
EAS
Non_SSA
false
true
Female
60
Westernized_high_fat_sugar
Ruminococcus_like
3.193
165
0.1485
0.1745
0.27
0.4069
3.577932
2.460934
3.579862
MICROBIOME_SAMPLE_09968
EAS
Non_SSA
false
true
Female
63
High_fiber_plant_rich
Bacteroides
4.024
143
0.6255
0.1022
0.1616
0.1107
3.302078
3.913483
2.996633
MICROBIOME_SAMPLE_09969
EAS
Non_SSA
false
true
Female
41
Mixed_transition
Ruminococcus_like
3.374
163
0.2218
0.1634
0.3043
0.3105
3.07075
3.104531
2.973519
MICROBIOME_SAMPLE_09970
EAS
Non_SSA
false
true
Female
50
Westernized_high_fat_sugar
Bacteroides
3.12
125
0.5938
0.1027
0.1337
0.1698
2.445103
4.181951
2.758231
MICROBIOME_SAMPLE_09971
EAS
Non_SSA
false
true
Female
32
Mixed_transition
Prevotella
3.237
160
0.0755
0.6377
0.1282
0.1586
4.865395
2.382716
2.911976
MICROBIOME_SAMPLE_09972
EAS
Non_SSA
false
true
Female
54
Mixed_transition
Ruminococcus_like
3.022
117
0.1602
0.1831
0.2736
0.3831
2.807994
2.605116
4.336708
MICROBIOME_SAMPLE_09973
EAS
Non_SSA
false
true
Female
32
High_fiber_plant_rich
Ruminococcus_like
3.56
116
0.1367
0.1565
0.2976
0.4092
3.455709
3.171178
4.05886
MICROBIOME_SAMPLE_09974
EAS
Non_SSA
false
true
Female
71
High_fiber_plant_rich
Bacteroides
3.034
155
0.6188
0.0416
0.2193
0.1204
3.332509
4.266481
2.56688
MICROBIOME_SAMPLE_09975
EAS
Non_SSA
false
true
Female
73
High_fiber_plant_rich
Prevotella
3.005
203
0.0863
0.6478
0.1301
0.1358
4.237241
2.251882
3.50529
MICROBIOME_SAMPLE_09976
EAS
Non_SSA
false
true
Female
58
High_fiber_plant_rich
Ruminococcus_like
3.011
196
0.1614
0.1757
0.2846
0.3783
2.894326
2.173624
3.453979
MICROBIOME_SAMPLE_09977
EAS
Non_SSA
false
true
Female
39
Mixed_transition
Bacteroides
3.653
133
0.5832
0.0511
0.1951
0.1707
2.583014
3.81863
1.914403
MICROBIOME_SAMPLE_09978
EAS
Non_SSA
false
true
Female
60
Mixed_transition
Bacteroides
3.162
150
0.6096
0.0991
0.1618
0.1295
2.051323
4.613261
2.395956
MICROBIOME_SAMPLE_09979
EAS
Non_SSA
false
true
Female
76
Mixed_transition
Bacteroides
2.567
200
0.6332
0.0709
0.1339
0.162
2.30071
3.714419
2.163266
MICROBIOME_SAMPLE_09980
EAS
Non_SSA
false
true
Female
61
Westernized_high_fat_sugar
Prevotella
3.433
143
0.1103
0.605
0.1527
0.1319
4.304976
2.144213
2.737193
MICROBIOME_SAMPLE_09981
EAS
Non_SSA
false
true
Female
69
Westernized_high_fat_sugar
Ruminococcus_like
3.517
131
0.1674
0.2132
0.273
0.3464
3.275874
2.737405
3.373823
MICROBIOME_SAMPLE_09982
EAS
Non_SSA
false
true
Female
51
High_fiber_plant_rich
Prevotella
2.906
167
0.0159
0.6942
0.166
0.1239
4.167574
2.387452
2.730477
MICROBIOME_SAMPLE_09983
EAS
Non_SSA
false
true
Female
46
High_fiber_plant_rich
Bacteroides
3.493
120
0.6233
0.0524
0.1481
0.1762
2.844538
3.976428
1.320102
MICROBIOME_SAMPLE_09984
EAS
Non_SSA
false
true
Female
55
Westernized_high_fat_sugar
Prevotella
3.636
188
0.0277
0.649
0.1676
0.1556
4.431837
2.85337
2.782483
MICROBIOME_SAMPLE_09985
EAS
Non_SSA
false
true
Female
35
Westernized_high_fat_sugar
Bacteroides
3.754
174
0.6082
0.0739
0.1646
0.1533
2.433874
4.283127
2.122989
MICROBIOME_SAMPLE_09986
EAS
Non_SSA
false
true
Female
81
Mixed_transition
Ruminococcus_like
3.518
189
0.2262
0.1995
0.2238
0.3505
3.360079
2.878436
3.170242
MICROBIOME_SAMPLE_09987
EAS
Non_SSA
false
true
Female
58
Westernized_high_fat_sugar
Prevotella
3.408
137
0.0706
0.6308
0.1611
0.1375
3.888063
2.335375
2.670187
MICROBIOME_SAMPLE_09988
EAS
Non_SSA
false
true
Female
66
Westernized_high_fat_sugar
Bacteroides
3.664
129
0.5774
0.1305
0.1444
0.1477
2.564283
3.823874
2.273056
MICROBIOME_SAMPLE_09989
EAS
Non_SSA
false
true
Female
51
Mixed_transition
Ruminococcus_like
3.05
172
0.2116
0.226
0.2399
0.3225
3.449263
3.267335
3.647781
MICROBIOME_SAMPLE_09990
EAS
Non_SSA
false
true
Female
39
Westernized_high_fat_sugar
Ruminococcus_like
3.381
147
0.1947
0.1868
0.2714
0.347
3.235708
2.859507
3.467044
MICROBIOME_SAMPLE_09991
EAS
Non_SSA
false
true
Female
72
High_fiber_plant_rich
Bacteroides
3.874
172
0.6302
0.094
0.1028
0.173
2.190129
4.372761
1.795491
MICROBIOME_SAMPLE_09992
EAS
Non_SSA
false
true
Female
44
Mixed_transition
Ruminococcus_like
4.157
190
0.2304
0.1342
0.3073
0.3281
3.650508
2.826342
3.36079
MICROBIOME_SAMPLE_09993
EAS
Non_SSA
false
true
Female
60
Westernized_high_fat_sugar
Ruminococcus_like
3.601
134
0.1638
0.1813
0.246
0.4089
3.331758
2.463497
3.984767
MICROBIOME_SAMPLE_09994
EAS
Non_SSA
false
true
Female
61
Mixed_transition
Ruminococcus_like
3.193
193
0.1392
0.2234
0.2536
0.3838
3.505367
4.078968
3.71539
MICROBIOME_SAMPLE_09995
EAS
Non_SSA
false
true
Female
57
Westernized_high_fat_sugar
Ruminococcus_like
3.022
149
0.1825
0.1818
0.2675
0.3682
3.523304
2.491445
3.345195
MICROBIOME_SAMPLE_09996
EAS
Non_SSA
false
true
Female
47
High_fiber_plant_rich
Bacteroides
3.374
196
0.5898
0.1031
0.1372
0.1699
2.392877
3.415075
3.140267
MICROBIOME_SAMPLE_09997
EAS
Non_SSA
false
true
Female
54
High_fiber_plant_rich
Prevotella
3.086
127
0.1144
0.6529
0.1144
0.1183
4.084442
2.236869
2.592498
MICROBIOME_SAMPLE_09998
EAS
Non_SSA
false
true
Male
46
Mixed_transition
Ruminococcus_like
2.839
131
0.2199
0.1415
0.2677
0.371
3.610672
2.480365
3.058878
MICROBIOME_SAMPLE_09999
EAS
Non_SSA
false
true
Female
65
Mixed_transition
Bacteroides
3.656
203
0.6509
0.0588
0.1454
0.1449
2.238959
3.965934
1.911556
MICROBIOME_SAMPLE_10000
EAS
Non_SSA
false
true
Female
62
Westernized_high_fat_sugar
Prevotella
3.56
114
0.0522
0.673
0.1378
0.1369
3.994293
2.17203
3.164969