Search is not available for this dataset
id
float64 286
2.87k
⌀ | design
stringlengths 1
92
⌀ | sequence
stringlengths 74
86
| activation_ratio
float64 0.02
60
| ligand
stringclasses 3
values | switch
stringclasses 2
values | kd_off
float64 2.54
1.9k
| kd_on
float64 2.53
1.53k
| kd_fmn
float64 8.14
1.7k
⌀ | kd_no_fmn
float64 8.17
1.72k
⌀ | min_kd_val
float64 2.53
10.3
| ms2_aptamer
stringclasses 128
values | lig_aptamer
stringclasses 59
values | ms2_lig_aptamer
stringclasses 406
values | log_kd_nolig
float64 0.93
7.45
| log_kd_lig
float64 0.93
7.55
| log_kd_nolig_scaled
float64 0
6.43
| log_kd_lig_scaled
float64 -0.16
5.98
| log_AR
float64 -3.72
4.09
| folding_subscore
float64 4.86
30
⌀ | num_clusters
float64 51
930
⌀ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
null |
JR_Ex4_Sub066
|
AGGUAGUCAGGAUAUUAGUGGUAGAGGGAUAACUUUAUUGUUGAGAAGGGACAUGAGGAUCACCCAUGUUUUGU
| 1.2355 |
FMN
|
OFF
| 32.445513 | 26.261045 | 32.445513 | 26.261045 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.268087 | 3.479562 | 1.091164 | 1.30264 | 0.211476 | null | 75 |
null |
JR_Ex3_Sub060
|
GCGUACUGAGGAUAUACAUGAGGAUCACCCAUGUGACACAGCGUUUAGUGAUGAAUUUGUAGAAGGCAGUAGGC
| 1.495137 |
FMN
|
OFF
| 218.84106 | 146.368595 | 218.84106 | 146.368595 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.986128 | 5.388346 | 2.809206 | 3.211423 | 0.402218 | null | 78 |
null |
JR_Ex1_Sub072
|
GGAAAACAUGAGGAUCACCCAUGUGAGGAUAUGAGCGUCUAGUUGAGAGAUUGGACGCUCAGAAGGCACAUGCC
| 8.669711 |
FMN
|
OFF
| 247.373402 | 28.533061 | 247.373402 | 28.533061 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.351063 | 5.510899 | 1.174141 | 3.333977 | 2.159835 | null | 85 |
null |
EX6 #20
|
AAAUAGCUAGAGGAUAUCGGAUAGGAUUUACUACGAGAAGGUUAGACAUGAGGAUCACCCAUGUUCUGUUGGGA
| 0.944996 |
FMN
|
OFF
| 39.237679 | 41.521512 | 39.237679 | 41.521512 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.726212 | 3.669637 | 1.549289 | 1.492715 | -0.056574 | null | 70 |
null |
Beusen
|
AAAUACAGAGGAUAUGUACGAAUUGACAUGAGGAUCACCCAUGUGACUUCGUGCACUUUGACAGAAGGCUGGGAAU
| 1.951946 |
FMN
|
OFF
| 32.739343 | 16.772665 | 32.739343 | 16.772665 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.81975 | 3.488578 | 0.642828 | 1.311655 | 0.668827 | null | 62 |
null |
EX6 #48
|
AAAUCGGUAGAGGAUAUUGUACAGGAAACGGUGCGAGAAGGUUGCACAUGAGGAUCACCCAUGUUUAGUUGCGA
| 0.972098 |
FMN
|
OFF
| 33.964142 | 34.939022 | 33.964142 | 34.939022 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.553604 | 3.525305 | 1.376682 | 1.348383 | -0.028299 | null | 57 |
null |
EX6 #73
|
AACUCUGAGAAGGAUAUUCAAUGGGAAACGAUGGAAGAAGGUUUCACAUGAGGAUCACCCAUGUCGAAUAGUGA
| 0.888715 |
FMN
|
OFF
| 63.935052 | 71.940969 | 63.935052 | 71.940969 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 4.275846 | 4.157868 | 2.098924 | 1.980945 | -0.117978 | null | 54 |
null |
EX6 #86
|
ACCUAUGAGGAGGAUAUACGGUGCGAAAGGAAGGUAGAAGGCUUCACAUGAGGAUCACCCAUGUCUAUAAGCGA
| 0.955907 |
FMN
|
OFF
| 29.507451 | 30.868525 | 29.507451 | 30.868525 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.429737 | 3.384643 | 1.252815 | 1.20772 | -0.045094 | null | 58 |
null |
Soesleatte
|
AAUUACAGAGGAUAUGCGCGGUAAAACAUGAGGAUCACCCAUGUGAUACCUGCAUGACCGGCAGAAGGCUGCGUUU
| 4.869668 |
FMN
|
OFF
| 108.499446 | 22.280664 | 108.499446 | 22.280664 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 3.103719 | 4.686745 | 0.926797 | 2.509823 | 1.583026 | null | 74 |
null |
JL-BMX4-4.47 ViennaUCT mod
|
AUUCCUAGUGUUAGGAUAUGCGACGGGUGACCGUUGCAGAAGGAACAUGAGGAUCACCCAUGUUUAAUAAAAUC
| 5.167263 |
FMN
|
OFF
| 80.734569 | 15.624241 | 80.734569 | 15.624241 | 8.819122 |
............................................(((((x((xxxx)))))))...........
|
...........(xxxxxx(..................)xxxxx)..............................
|
...........(xxxxxx(..................)xxxxx)(((((x((xxxx)))))))...........
| 2.748824 | 4.391167 | 0.571901 | 2.214245 | 1.642343 | null | 61 |
null |
lam1
|
UCGUGUAUAGAGGAUAUAUUAUUUUUUUUAACAAUAGAAGGCUAAACAUGAGGAUCACCCAUGUAUUUUUUUUU
| 1.397844 |
FMN
|
OFF
| 43.94793 | 31.439799 | 43.94793 | 31.439799 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.448075 | 3.783006 | 1.271152 | 1.606083 | 0.334931 | null | 102 |
null |
Quesusdi
|
AUAAAGCGAGGAUAUCGCGCGGAGUACAUGAGGAUCACCCAUGUGGUCCGCAGUCCUGCGCGAGAAGGCGCAUUCC
| 0.393303 |
FMN
|
OFF
| 54.190957 | 137.78426 | 54.190957 | 137.78426 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 4.925689 | 3.992514 | 2.748767 | 1.815592 | -0.933175 | null | 82 |
null |
JR_Ex6_Sub074
|
UUACGGAUAGAGGAUAUAUUAAGGAAAGUUUCGAUAGAAGGCUAGACAUGAGGAUCACCCAUGUAUAUUGGGAU
| 1.149671 |
FMN
|
OFF
| 150.834717 | 131.198117 | 150.834717 | 131.198117 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 4.876709 | 5.016185 | 2.699786 | 2.839262 | 0.139476 | null | 63 |
null |
E6/4-B1
|
GGCCGUAAUAAGGAUAUCACUAGCUUCGGCUAGUGAGAAGGUAUUACAUGAGGAUCACCCAUGUGGUCAGGCCA
| 2.61786 |
FMN
|
OFF
| 730.143117 | 278.908369 | 730.143117 | 278.908369 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 5.630883 | 6.593241 | 3.453961 | 4.416318 | 0.962357 | null | 53 |
null |
EX3 #75
|
AGCGAGGUAGGAUAUACAUGAGGAUCACCCAUGUGCUUGCAUGGCGUGGAACAUCGUAGUAGAAGGGCCGCGCC
| 1.967755 |
FMN
|
OFF
| 40.208322 | 20.433598 | 40.208322 | 20.433598 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.017181 | 3.694074 | 0.840258 | 1.517152 | 0.676893 | null | 56 |
null |
אותו מדינה אחת-16
|
CUCAAACAUGAGGAUCACCCAUGUGUUGUCGUGGGAGGAUAUCCCAGUUCGGUGGCGUCGGGAGAAGGCCUAUGUC
| 2.177184 |
FMN
|
ON
| 140.854729 | 64.695839 | 64.695839 | 140.854729 | 8.819122 |
.....(((((x((xxxx)))))))....................................................
|
..................................(xxxxxx(....................)xxxxx).......
|
.....(((((x((xxxx)))))))..........(xxxxxx(....................)xxxxx).......
| 4.947729 | 4.169697 | 2.770807 | 1.992775 | 0.778032 | null | 81 |
null |
Exclusion 6 - B - 10:d
|
UCAAGUAUGUAGGAUAUCGAUGUCUACGGACAUCGAGAAGGACGUACAUGAGGAUCACCCAUGUAACUUGCAUG
| 0.404848 |
FMN
|
OFF
| 187.752347 | 463.760139 | 187.752347 | 463.760139 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 6.139367 | 5.235124 | 3.962445 | 3.058201 | -0.904244 | null | 82 |
null |
E1/1-A1
|
AGAUCACAUGAGGAUCACCCAUGUCAGGAUAUCGACUGAACAGCUUCGGCUGUUCAGUCGAGAAGGGACAAUUA
| 3.083532 |
FMN
|
OFF
| 859.598513 | 278.770752 | 859.598513 | 278.770752 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 5.63039 | 6.756465 | 3.453467 | 4.579543 | 1.126076 | null | 85 |
null |
jun14#1
|
CCGCCAUAAGUCAGGAUAUUCUUUAAGUUGUUGGAGAAGAAGGGACAUGAGGAUCACCCAUGUAAUAGGCCUCA
| 0.710413 |
FMN
|
OFF
| 597.966096 | 841.71665 | 597.966096 | 841.71665 | 8.819122 |
............................................(((((x((xxxx)))))))...........
|
...........(xxxxxx(..................)xxxxx)..............................
|
...........(xxxxxx(..................)xxxxx)(((((x((xxxx)))))))...........
| 6.735443 | 6.393534 | 4.558521 | 4.216612 | -0.341909 | null | 85 |
null |
MS2A
|
CGGGCACAUGAGGAUCACCCAUGUCAGGAUAUCGGCCGGCGGCCGCCGGGCCGCCGGCCGAGAAGGGACGCCCG
| 1.139982 |
FMN
|
OFF
| 18.714013 | 16.41606 | 18.714013 | 16.41606 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.79826 | 2.929273 | 0.621338 | 0.75235 | 0.131012 | null | 108 |
null |
Teveagees
|
GCCUCACAUGAGGAUCACCCAUGUCAGGAUAUCUCAGCCUCACAUCAAACAAGGCUUCAGAGAAGGGACGUAAA
| 2.069627 |
FMN
|
OFF
| 77.380647 | 37.388685 | 77.380647 | 37.388685 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.621368 | 4.348737 | 1.444446 | 2.171814 | 0.727369 | null | 52 |
null |
E1/9-B2
|
UGGUCACAUGAGGAUCACCCAUGUCAGGAUAUCUACAUUGAAGCCUCGGCUUCAAUGUAGAGAAGGGAUAUAAU
| 2.262793 |
FMN
|
OFF
| 148.114205 | 65.456373 | 148.114205 | 65.456373 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.181384 | 4.997984 | 2.004462 | 2.821061 | 0.8166 | null | 107 |
null |
Enleenbiqu
|
GCCUCACAUGAGGAUCACCCAUGUCAGGAUAUACCCAUCCGGCGCAAUUGCAGCCGUAGUAGAAGGGACAUGCA
| 2.163239 |
FMN
|
OFF
| 45.843802 | 21.192201 | 45.843802 | 21.192201 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.053633 | 3.82524 | 0.876711 | 1.648318 | 0.771607 | null | 127 |
null |
Inedri
|
AAAAUACAUGAGGAUCACCCAUGUUAGGAUAUCCAAGGCCUGACCCUCAAGGUCAGGCGGAGAAGGGAUGUGGU
| 1.01741 |
FMN
|
OFF
| 51.295345 | 50.417586 | 51.295345 | 50.417586 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.92034 | 3.9376 | 1.743418 | 1.760678 | 0.01726 | null | 86 |
null |
Lagean
|
AGAAAACAUGAGGAUCACCCAUGUCAGGAUAUCUCCAAGGCUUAACAUCCAGCCCUGCAGAGAAGGGACGGGUG
| 2.565847 |
FMN
|
OFF
| 225.49165 | 87.881951 | 225.49165 | 87.881951 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.475994 | 5.418283 | 2.299072 | 3.241361 | 0.942289 | null | 56 |
null |
Lexetianla
|
AAGUAACAUGAGGAUCACCCAUGUUAGGAUAUCUCGGCCACAGGAUCGCUGUGAAGCCAGAGAAGGAGCGGGUG
| 1.068561 |
FMN
|
OFF
| 186.473755 | 174.50917 | 186.473755 | 174.50917 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 5.161977 | 5.228291 | 2.985055 | 3.051368 | 0.066313 | null | 62 |
null |
Diedesa
|
CCCUCACAUGAGGAUCACCCAUGUCAGGAUAUCCAGCCCUACUAUAAAGCGUCUGGCGGGAGAAGGGACAGGAU
| 1.362485 |
FMN
|
OFF
| 28.501453 | 20.918726 | 28.501453 | 20.918726 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.040645 | 3.349955 | 0.863722 | 1.173033 | 0.30931 | null | 106 |
null |
Riarve
|
UUACAGCACGGGUAGGAUAUGUAGGGUGGUACAUGAGGAUCACCCAUGUAUCCACCCUUCUAACGGCAGAAGGGCCUGUCGCUGC
| 1.520379 |
FMN
|
ON
| 31.77796 | 20.901343 | 20.901343 | 31.77796 | 8.819122 |
..............................(((((x((xxxx)))))))....................................
|
............(xxxxxx(...............................................)xxxxx)...........
|
............(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx)...........
| 3.458773 | 3.039813 | 1.281851 | 0.862891 | 0.41896 | null | 79 |
null |
Ex 3 Optimization 2
|
GGCCGGGCAGGAUAUACAUGAGGAUCACCCAUGUAUAUCCUUCAGCAUGGAUCCUCAUGUAGAAGGGCCCGGCC
| 0.900916 |
FMN
|
OFF
| 11.928872 | 13.240829 | 11.928872 | 13.240829 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.583305 | 2.478962 | 0.406383 | 0.302039 | -0.104343 | null | 65 |
null |
E2/6-D2
|
UCUGGAGCAGGAUAUGCAUUCGUGCUUCGGCACGUAAGGUCACAUGAGGAUCACCCAUGUAGAAGGGCUCCAGA
| 1.768417 |
FMN
|
OFF
| 34.008658 | 19.231127 | 34.008658 | 19.231127 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.95653 | 3.526615 | 0.779608 | 1.349693 | 0.570085 | null | 64 |
null |
JR_Exc1_Sub017
|
GACCUACAUGAGGAUCACCCAUGUGAGGAUAUAUUGUUAUUUUUAAUAUUUUUUAGUGGUAGAAGGCGCGUGAU
| 0.94002 |
FMN
|
OFF
| 17.275222 | 18.377513 | 17.275222 | 18.377513 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.911128 | 2.849273 | 0.734205 | 0.672351 | -0.061855 | null | 126 |
null |
JR_Exc1_Sub028
|
AACUCACAUGAGGAUCACCCAUGUGAGGAUAUAUAAAUAUAUAUGUUAUUAUAUAUUUAUAGAAGGCGCGUGAU
| 1.063467 |
FMN
|
OFF
| 46.852936 | 44.056791 | 46.852936 | 44.056791 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.78548 | 3.847014 | 1.608557 | 1.670091 | 0.061534 | null | 65 |
null |
EX3 #10
|
AUAUAGCGAGGAUAUACAUGAGGAUCACCCAUGUGGUAGUAGAUACGGUAGAGCUAGUGUAGAAGGCGCUAUGA
| 0.345797 |
FMN
|
OFF
| 160.12241 | 463.053062 | 160.12241 | 463.053062 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 6.137842 | 5.075939 | 3.960919 | 2.899016 | -1.061903 | null | 55 |
null |
EX2 #68
|
UCUGUUCAAGGAUAUGCGUAAUGUGUUACGGCACGAGGUCUACAUGAGGAUCACCCAUGUAGAAGGUGAUCAGA
| 1.030401 |
FMN
|
OFF
| 22.164486 | 21.510553 | 22.164486 | 21.510553 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.068544 | 3.098491 | 0.891621 | 0.921569 | 0.029948 | null | 87 |
null |
JR_Ex2_Sub024
|
UCCUGGCGAGGAUAUACAAUGUUUUUCGCGUGUAGUUGGAAACAUGAGGAUCACCCAUGUAGAAGGUGCUACUG
| 0.784344 |
FMN
|
OFF
| 25.559579 | 32.587201 | 25.559579 | 32.587201 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.48392 | 3.241012 | 1.306997 | 1.06409 | -0.242907 | null | 65 |
null |
Maesorreat
|
AACAUGUGAGGAUAUGAGAACAGCCGGGAGGGCUGUGUAAAUUAGAAGGCACAUGAGGAUCACCCAUGUGACCU
| 1.528224 |
FMN
|
OFF
| 27.751487 | 18.159311 | 27.751487 | 18.159311 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 2.899183 | 3.323289 | 0.722261 | 1.146367 | 0.424106 | null | 72 |
null |
EX3 #52
|
GCGCUGCGAGGAUAUACAUGAGGAUCACCCAUGUGUCGGCAGCCAUGCUAGUACAAAUGUAGAAGGCGCGUAAA
| 1.060789 |
FMN
|
OFF
| 17.834991 | 16.812946 | 17.834991 | 16.812946 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.822149 | 2.881162 | 0.645227 | 0.70424 | 0.059013 | null | 80 |
null |
Artearat
|
CUCGUGUUAGGAUAUCGUGGCUGGGCUGGGACGUCCGAUCGCGAGAAGGGACAUGAGGAUCACCCAUGUAAAAC
| 2.341403 |
FMN
|
OFF
| 86.01184 | 36.735169 | 86.01184 | 36.735169 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.603735 | 4.454485 | 1.426812 | 2.277563 | 0.85075 | null | 60 |
null |
Arerite
|
CUUCUGUCAGGAUAUGCGAAUCACCACUGGGUCAGUGGUGAGCAGAAGGGACAUGAGGAUCACCCAUGUAAAGU
| 4.659434 |
FMN
|
OFF
| 169.269056 | 36.328244 | 169.269056 | 36.328244 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.592596 | 5.131489 | 1.415673 | 2.954567 | 1.538894 | null | 70 |
null |
Biesce
|
CCCAUGUUAGGAUAUAUGGAAGGGCGGACGGGCGCCCUUAGGUAGAAGGAACAUGAGGAUCACCCAUGUAAUAA
| 0.942851 |
FMN
|
OFF
| 161.033422 | 170.794088 | 161.033422 | 170.794088 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 5.140459 | 5.081612 | 2.963536 | 2.90469 | -0.058847 | null | 52 |
null |
Teatat
|
CUCAUGUAAGGAUAUCUACGCGCUAAGGUGCGUCUAUCACAAGAGAAGGUACAUGAGGAUCACCCAUGUAAAGA
| 1.23771 |
FMN
|
OFF
| 127.394421 | 102.927498 | 127.394421 | 102.927498 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 4.634025 | 4.847288 | 2.457103 | 2.670366 | 0.213263 | null | 56 |
null |
E3/7-A4
|
UCUGGUCGAGGAUAUACAUGAGGAUCACCCAUGUUGAUCAAGCGACUUCGGUCGCAAUGUAGAAGGCGACCAGA
| 0.290239 |
FMN
|
OFF
| 181.880058 | 626.656552 | 181.880058 | 626.656552 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 6.440399 | 5.203347 | 4.263476 | 3.026425 | -1.237051 | null | 79 |
null |
E4/4-B1
|
AUAAUGUGAGGAUAUCAGUAAGAAUGCUUCGGCAUUCUUACUGAGAAGGCACAUGAGGAUCACCCAUGUGAUUA
| 4.80337 |
FMN
|
OFF
| 963.99913 | 200.692244 | 963.99913 | 200.692244 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 5.301773 | 6.87109 | 3.12485 | 4.694168 | 1.569318 | null | 55 |
null |
E4/9-B1
|
AUAAUGUAAGGAUAUCAGUCGUAAUUAAUUUAAUUAUCGACUGAGAAGGUACAUGAGGAUCACCCAUGUGGUCA
| 0.11168 |
FMN
|
OFF
| 102.318845 | 916.179167 | 102.318845 | 916.179167 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 6.820212 | 4.628094 | 4.64329 | 2.451172 | -2.192118 | null | 78 |
null |
E3/2-D1
|
ACAGGUGCAGGAUAUACAUGAGGAUCACCCAUGUGAUUAGCAGUCCUCGGACUGCAAUGUAGAAGGGCACCUGU
| 3.413211 |
FMN
|
OFF
| 1,116.604327 | 327.141932 | 1,116.604327 | 327.141932 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 5.790394 | 7.018048 | 3.613472 | 4.841125 | 1.227653 | null | 56 |
null |
Ditexein
|
GGUCAGCUAGGAUAUACAUGAGGAUCACCCAUGUACUGACCCAUGCGGGAGUCCGCAUGUAGAAGGAGCAAAAU
| 1.078431 |
FMN
|
OFF
| 22.567786 | 20.926508 | 22.567786 | 20.926508 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.041017 | 3.116524 | 0.864094 | 0.939601 | 0.075507 | null | 65 |
null |
Usmarexe
|
CUGUUUGUAGGAUAUACAUGCGGAACCCUCUUCAUGGAAAGACAUGAGGAUCACCCAUGUAGAAGGAUGAAGAG
| 0.908048 |
FMN
|
OFF
| 17.912911 | 19.726836 | 17.912911 | 19.726836 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.98198 | 2.885522 | 0.805058 | 0.708599 | -0.096458 | null | 52 |
null |
Oninerisqu
|
UAGCCACAAGGAUAUACAUGAGGAUCACCCAUGUUUCCAGGAUGCCCUCUCAUGGGUUGUAGAAGGUGUCGGCG
| 1.132946 |
FMN
|
OFF
| 17.875866 | 15.778217 | 17.875866 | 15.778217 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.75863 | 2.883452 | 0.581708 | 0.706529 | 0.124821 | null | 133 |
null |
Veatonso
|
AACAAGCAAGGAUAUACAUGAGGAUCACCCAUGUCGUCUAAACGUACAUGCUACUCUUGUAGAAGGUGCAAAAU
| 4.15123 |
FMN
|
OFF
| 536.733092 | 129.29496 | 536.733092 | 129.29496 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.862096 | 6.285501 | 2.685174 | 4.108579 | 1.423405 | null | 54 |
null |
E5/5-A2
|
UGCAGACGAGGAUAUGAUCAAUAAUACAUGAGGAUCACCCAUGUAAUACUGAUCCAUGGAUCAGAAGGCGUCUGCA
| 1.373147 |
FMN
|
OFF
| 22.951455 | 16.714496 | 22.951455 | 16.714496 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.816276 | 3.133381 | 0.639354 | 0.956459 | 0.317105 | null | 53 |
null |
EX2 #13
|
GAAUAGCGAGGAUAUGCAAUGAAGAUAGUACGAUAUGGCUGACAUGAGGAUCACCCAUGUAGAAGGCGCUGAUC
| 0.891743 |
FMN
|
OFF
| 39.94547 | 44.794831 | 39.94547 | 44.794831 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.802093 | 3.687515 | 1.62517 | 1.510593 | -0.114577 | null | 51 |
null |
Mavequis
|
ACCACGGGAGGAUAUACAUGAGGAUCACCCAUGUCAACUCCACGUGCCCACGUCCUCUGUAGAAGGCCCUACAU
| 1.518822 |
FMN
|
OFF
| 24.266716 | 15.977323 | 24.266716 | 15.977323 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.77117 | 3.189106 | 0.594248 | 1.012183 | 0.417935 | null | 70 |
null |
Eddige
|
GAAAAGCGAGGAUAUACAUGAGGAUCACCCAUGUGUUGGGUGCGUUGGCUAGUCGUCUGUAGAAGGCGCACAAA
| 0.515077 |
FMN
|
OFF
| 465.655061 | 904.04911 | 465.655061 | 904.04911 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 6.806884 | 6.143445 | 4.629961 | 3.966523 | -0.663439 | null | 83 |
null |
Orveenle
|
AGGGUAGUAGGAUAUACAUGAGGAUCACCCAUGUUUCCUUUACGUGACUGGUCCUAGUGUAGAAGGGCUAGCAC
| 0.936604 |
FMN
|
OFF
| 14.838121 | 15.842474 | 14.838121 | 15.842474 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.762695 | 2.6972 | 0.585772 | 0.520277 | -0.065495 | null | 164 |
null |
Geleatvees
|
AACGUCGAAGGAUAUACAUGAGGAUCACCCAUGUGGGACCUGUAGUCUCACCCAUCGUGUAGAAGGUUGAGGCA
| 0.922334 |
FMN
|
OFF
| 29.73223 | 32.235844 | 29.73223 | 32.235844 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.473079 | 3.392232 | 1.296157 | 1.215309 | -0.080847 | null | 69 |
null |
EX1 #24
|
ACCUCACAUGAGGAUCACCCAUGUCAGGAUAUCUUUUAAAACAGCAAUCCUGUCGCUGAGAGAAGGGACAUUAA
| 1.291677 |
FMN
|
OFF
| 35.636618 | 27.58942 | 35.636618 | 27.58942 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.317432 | 3.573374 | 1.14051 | 1.396451 | 0.255941 | null | 87 |
null |
EX1 #60
|
AGAUAACAUGAGGAUCACCCAUGUGAGGAUAUUUACCCAAGAGCUUCGGCUCUCAGGUGGAGAAGGCACGUUGA
| 1.496023 |
FMN
|
OFF
| 76.758987 | 51.308712 | 76.758987 | 51.308712 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.937861 | 4.34067 | 1.760938 | 2.163748 | 0.40281 | null | 58 |
null |
EX1 #67
|
GUUUGACAUGAGGAUCACCCAUGUAAGGAUAUACGAGUAGCUGCUAGGUAGUUAGUAUGUAGAAGGUGCGUGUU
| 0.952995 |
FMN
|
OFF
| 62.630806 | 65.719971 | 62.630806 | 65.719971 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 4.185403 | 4.137257 | 2.008481 | 1.960335 | -0.048146 | null | 56 |
null |
EX2 A.9
|
AAACACGGAGGAUAUACAGGUUCGGGAAACCGAACCGGCUGACAUGAGGAUCACCCAUGUAGAAGGCCGAAAUA
| 2.36957 |
FMN
|
OFF
| 45.82174 | 19.337575 | 45.82174 | 19.337575 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.96205 | 3.824759 | 0.785128 | 1.647836 | 0.862709 | null | 60 |
null |
salish99_ex3_r4_015
|
GGUUGGCGAGGAUAUACAUGAGGAUCACCCAUGUGGUCCUGUGGCUGAUCUUGCCUUUGUAGAAGGCGCAAAUC
| 2.042622 |
FMN
|
OFF
| 37.824115 | 18.517435 | 37.824115 | 18.517435 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.918713 | 3.632947 | 0.74179 | 1.456025 | 0.714234 | null | 93 |
null |
EX6 C.22
|
CGUUGUGAAGAGGAUAUCCAACAAAGUUGUCAAGGAGAAGGCUUCACAUGAGGAUCACCCAUGUUAUGCCUUAU
| 4.404687 |
FMN
|
OFF
| 80.205999 | 18.20924 | 80.205999 | 18.20924 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.901929 | 4.384598 | 0.725007 | 2.207676 | 1.482669 | null | 70 |
null |
EX6 C.27
|
CCUCUGUCCGAGGAUAUGAGGUUAACGUGACCGUCAGAAGGCGGAACAUGAGGAUCACCCAUGUUUUGCGCAUG
| 1.537137 |
FMN
|
OFF
| 68.020324 | 44.251315 | 68.020324 | 44.251315 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.789885 | 4.219807 | 1.612963 | 2.042884 | 0.429921 | null | 155 |
null |
jl-ex1-4.61 ViennaUCT mod
|
AUCCUACAUGAGGAUCACCCAUGUCAGGAUAUCCAAGAAAUGUGGCCGUAUCGGCCACGGAGAAGGGACGGGUG
| 1.518996 |
FMN
|
OFF
| 60.782522 | 40.014932 | 60.782522 | 40.014932 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.689253 | 4.107302 | 1.51233 | 1.93038 | 0.41805 | null | 77 |
null |
Exclusion 5 (FMN-MS2 slide v.2)
|
GGUGAAGCAGGAUAUGUAUCGAUAUACAUGAGGAUCACCCAUGUCAUGUUCGAAUCGCAUAUAGAAGGGCUUCACC
| 1.243999 |
FMN
|
OFF
| 16.692797 | 13.418657 | 16.692797 | 13.418657 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.596646 | 2.814977 | 0.419724 | 0.638055 | 0.218331 | null | 97 |
null |
-27.4, -25.5 kcal, A 28% 1bis and 1bis
|
GCUUGAGCAGGAUAUACAAGCUUGAGCUGAAAAGUUCGAGUACAUGAGGAUCACCCAUGUAGAAGGGUUCGAGU
| 1.176771 |
FMN
|
OFF
| 32.313656 | 27.459599 | 32.313656 | 27.459599 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.312716 | 3.47549 | 1.135793 | 1.298568 | 0.162774 | null | 64 |
null |
-49.2, -46.6 kcal, 18% A
|
GGCCCGGGAGGAUAUACAUGAGGAUCACCCAUGUGCGGGCCCGGGAUCCCGGGCCCGUGUAGAAGGCCCGGGCC
| 1.22321 |
FMN
|
OFF
| 16.456975 | 13.45393 | 16.456975 | 13.45393 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.599271 | 2.800749 | 0.422349 | 0.623827 | 0.201478 | null | 136 |
null |
-24.9, -22.3 kcal, 26% A, 3 , 3 bis
|
GCUUCGGCAGGAUAUACAUGAGGAUCACCCAUGUUGAAGUUGAAGAUCUUCGGCUUCGGUAGAAGGGUUGAAGU
| 0.844578 |
FMN
|
OFF
| 32.103687 | 38.011496 | 32.103687 | 38.011496 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.637889 | 3.468971 | 1.460966 | 1.292049 | -0.168918 | null | 56 |
null |
Exclusion 5 - Mod Ex.5 B.5
|
AUGACUCUAGGAUAUUAGCGGGCCUACAUGAGGAUCACCCAUGUCGUGUCGCGGGUAUGCUGAGAAGGAGAGCACA
| 1.256409 |
FMN
|
OFF
| 17.903141 | 14.249458 | 17.903141 | 14.249458 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 2.656719 | 2.884976 | 0.479797 | 0.708054 | 0.228257 | null | 84 |
null |
jl-ex1-4.70 ViennaUCT mod
|
ACCUCACAUGAGGAUCACCCAUGUAAGGAUAUCUUCGCUUUGACGUUGUUCUAUGCGAAGAGAAGGUACACGGC
| 3.901724 |
FMN
|
OFF
| 110.520461 | 28.326059 | 110.520461 | 28.326059 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.343782 | 4.705201 | 1.16686 | 2.528278 | 1.361418 | null | 68 |
null |
Exclusion 3 S2
|
GCGAUGUUAGGAUAUACAUGAGGAUCACCCAUGUUCAGACUGAGCCUAGAGCGUCUAUGUAGAAGGGACUCGCA
| 1.585916 |
FMN
|
OFF
| 43.094638 | 27.173346 | 43.094638 | 27.173346 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.302237 | 3.763399 | 1.125314 | 1.586476 | 0.461162 | null | 94 |
null |
jl-ex1-4.74 5966148 mod
|
ACCUCACAUGAGGAUCACCCAUGUUAGGAUAUUAAAUAGCGCGCAAAACAGCCCUGUAUGAGAAGGAGCUGGGA
| 1.094655 |
FMN
|
OFF
| 14.846599 | 13.562815 | 14.846599 | 13.562815 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.607332 | 2.697771 | 0.43041 | 0.520848 | 0.090439 | null | 72 |
null |
jl-ex1-4.75 5996513 mod
|
AACCGACAUGAGGAUCACCCAUGUAAGGAUAUCCACGGACAACGCCAUAGUUGCCGGCGGAGAAGGUGCGUGGU
| 1.772681 |
FMN
|
OFF
| 46.043891 | 25.974159 | 46.043891 | 25.974159 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.257102 | 3.829595 | 1.08018 | 1.652673 | 0.572493 | null | 79 |
null |
AK-MS2ROC-r4-exclusion2-16
|
GGAAGGUGAGGAUAUACAAUGACGGAAACGUCAGGUGAGAGACAUGAGGAUCACCCAUGUAGAAGGCACGGAGA
| 9.91359 |
FMN
|
OFF
| 730.093592 | 73.645736 | 730.093592 | 73.645736 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 4.299266 | 6.593173 | 2.122344 | 4.41625 | 2.293906 | null | 58 |
null |
jl-ex3-4.69 ViennaUCT mod
|
AAACAGGGAGGAUAUACAUGAGGAUCACCCAUGUUCGAGCGUCCUUGAACUACCUCAGGUAGAAGGCCCUAAUU
| 0.300531 |
FMN
|
OFF
| 111.660188 | 371.543292 | 111.660188 | 371.543292 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 5.917665 | 4.71546 | 3.740743 | 2.538538 | -1.202205 | null | 51 |
null |
eternacac ex6r4 sub8
|
GCGCGAAGGUAGGAUAUCCAGGGAUCUUCCCGCGGAGAAGGACCCACAUGAGGAUCACCCAUGUGGUGAUCCUG
| 1.079196 |
FMN
|
OFF
| 17.37417 | 16.099186 | 17.37417 | 16.099186 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.778769 | 2.854985 | 0.601846 | 0.678062 | 0.076216 | null | 78 |
null |
EX6 C.20
|
GCCCGCGCUAAGGAUAUCAGGGUUAAAAUAGUAUGAGAAGGUAGCACAUGAGGAUCACCCAUGUGUCCCUUAUG
| 1.050162 |
FMN
|
OFF
| 17.281699 | 16.456227 | 17.281699 | 16.456227 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.800704 | 2.849648 | 0.623782 | 0.672726 | 0.048944 | null | 64 |
null |
Design #4
|
AAGACACAUGAGGAUCACCCAUGUUAGGAUAUACGCAUGCAUGCAUGCAUGCAUGCAAGUAGAAGGAACCAUGC
| 1.005267 |
FMN
|
OFF
| 30.616198 | 30.455781 | 30.616198 | 30.455781 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.416276 | 3.421529 | 1.239354 | 1.244607 | 0.005253 | null | 64 |
null |
salish99_ex4_4_002
|
GUUGUGUAAGGAUAUGCCUGGCCGUGAGGCCAGAUUGAAUGGCAGAAGGUACAUGAGGAUCACCCAUGUACGGG
| 5.650024 |
FMN
|
OFF
| 187.514505 | 33.188268 | 187.514505 | 33.188268 | 8.819122 |
..................................................(((((x((xxxx))))))).....
|
.......(xxxxxx(............................)xxxxx)........................
|
.......(xxxxxx(............................)xxxxx)(((((x((xxxx))))))).....
| 3.502196 | 5.233856 | 1.325274 | 3.056934 | 1.73166 | null | 134 |
null |
Exclusion 2 S1
|
GACAACAGAGGAUAUGCAUUGAGAUAGUUAUGAAGGUUGUUACAUGAGGAUCACCCAUGUAGAAGGCUGUCGUU
| 1.326109 |
FMN
|
OFF
| 24.311113 | 18.332662 | 24.311113 | 18.332662 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.908684 | 3.190934 | 0.731762 | 1.014011 | 0.282249 | null | 77 |
null |
EX6 C.19
|
GCUAUAGCGGAGGAUAUCCCGAAAAGAAGUUUAGGAGAAGGCCGCACAUGAGGAUCACCCAUGUGAGUCCGCAA
| 5.230493 |
FMN
|
OFF
| 118.512342 | 22.657968 | 118.512342 | 22.657968 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 3.120512 | 4.775017 | 0.943589 | 2.598095 | 1.654506 | null | 56 |
null |
EX6 C.18
|
UCAAUUGCGUAGGAUAUACGGGCGCAGGCUAGAGUAGAAGGACGCACAUGAGGAUCACCCAUGUGGGUACCGAU
| 6.446814 |
FMN
|
OFF
| 114.01522 | 17.685515 | 114.01522 | 17.685515 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.872746 | 4.736332 | 0.695824 | 2.55941 | 1.863586 | null | 61 |
null |
EX6 C.13
|
AACCCUGCCUAGGAUAUACAAAAGUCACAGCUGGUAGAAGGAGGCACAUGAGGAUCACCCAUGUCACCUCGCUU
| 1.02171 |
FMN
|
OFF
| 13.693187 | 13.402219 | 13.693187 | 13.402219 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 2.59542 | 2.616898 | 0.418498 | 0.439976 | 0.021478 | null | 128 |
null |
EX1 C.2
|
UUUGUACAUGAGGAUCACCCAUGUCAGGAUAUGUCAUCGCCGUCCGACGGCCGGCGUCACAGAAGGGACAUGCA
| 2.811356 |
FMN
|
OFF
| 78.102614 | 27.781123 | 78.102614 | 27.781123 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.324357 | 4.358024 | 1.147434 | 2.181101 | 1.033667 | null | 71 |
null |
EX1 C.10
|
UACUGACAUGAGGAUCACCCAUGUGAGGAUAUUCUCCUGCUAAAUUAAUGGUGGGUGUGAAGAAGGCACAAGGA
| 3.209283 |
FMN
|
OFF
| 119.678958 | 37.29149 | 119.678958 | 37.29149 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 3.618765 | 4.784813 | 1.441843 | 2.60789 | 1.166048 | null | 60 |
null |
EX1 C.22
|
GCCGUACAUGAGGAUCACCCAUGUCAGGAUAUUUAGCACUCGGAAUUUCCGAGAGGUCAAAGAAGGGACAUUGC
| 1.532334 |
FMN
|
OFF
| 26.882091 | 17.543237 | 26.882091 | 17.543237 | 8.819122 |
.....(((((x((xxxx)))))))..................................................
|
........................(xxxxxx(............................)xxxxx).......
|
.....(((((x((xxxx)))))))(xxxxxx(............................)xxxxx).......
| 2.864669 | 3.29146 | 0.687746 | 1.114538 | 0.426792 | null | 98 |
null |
EX2 C.7
|
GCCGAAGGAGGAUAUACACCCGGUGGCAAAACGCCGGCUCGACAUGAGGAUCACCCAUGUAGAAGGCCUGUGGU
| 1.100145 |
FMN
|
OFF
| 17.994169 | 16.356176 | 17.994169 | 16.356176 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.794606 | 2.890048 | 0.617683 | 0.713125 | 0.095442 | null | 63 |
null |
EX2 C.15
|
UCCGGAGUAGGAUAUACGGUGUAAUGACACGGCGUCGAUCAACAUGAGGAUCACCCAUGUAGAAGGACUGCGUC
| 1.101772 |
FMN
|
OFF
| 15.861157 | 14.39604 | 15.861157 | 14.39604 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 2.666953 | 2.763873 | 0.490031 | 0.586951 | 0.09692 | null | 80 |
null |
EX2 C.19
|
GGUCACGUAGGAUAUACCUGGGCCUCUGAAUUCGGCAAUUUACAUGAGGAUCACCCAUGUAGAAGGACGAUGGC
| 0.811002 |
FMN
|
OFF
| 97.572672 | 120.311209 | 97.572672 | 120.311209 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 4.790082 | 4.580597 | 2.613159 | 2.403675 | -0.209484 | null | 58 |
null |
EX2 C.21
|
CCAAGGAGAGGAUAUACACGGUUAUGGCCUCUUGAGUGGCGACAUGAGGAUCACCCAUGUAGAAGGCUCAGGGC
| 2.834627 |
FMN
|
OFF
| 57.403854 | 20.250935 | 57.403854 | 20.250935 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.008201 | 4.050111 | 0.831279 | 1.873189 | 1.04191 | null | 119 |
null |
EX2 C.25
|
GUGCAGGUAGGAUAUACGUGAGAGCCUUGUGGGCGUCUGGUACAUGAGGAUCACCCAUGUAGAAGGACCGGGCU
| 3.635099 |
FMN
|
OFF
| 77.499519 | 21.319785 | 77.499519 | 21.319785 | 8.819122 |
.........................................(((((x((xxxx)))))))..............
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx(..........................(((((x((xxxx))))))))xxxxx).......
| 3.059636 | 4.350272 | 0.882713 | 2.173349 | 1.290636 | null | 182 |
null |
EX3 C.3
|
ACGGAGCUAGGAUAUACAUGAGGAUCACCCAUGUAUGAUGCGGCGCCCUUUUGCGCCUGUAGAAGGAGCACCGU
| 1.035824 |
FMN
|
OFF
| 16.51437 | 15.943217 | 16.51437 | 15.943217 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.769033 | 2.804231 | 0.592111 | 0.627309 | 0.035197 | null | 88 |
null |
EX3 C.6
|
UUACAGCAAGGAUAUACAUGAGGAUCACCCAUGUAUGCGUGUUCGAGAGAGGCCUACGGUAGAAGGUGCAUGUU
| 0.929035 |
FMN
|
OFF
| 22.44008 | 24.154192 | 22.44008 | 24.154192 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.184458 | 3.110849 | 1.007536 | 0.933926 | -0.073609 | null | 108 |
null |
EX3 C.7
|
CCGAGGCGAGGAUAUACAUGAGGAUCACCCAUGUCUGACCGACGCGCGCCAGGCAUAUGUAGAAGGCGCCGGAA
| 4.383226 |
FMN
|
OFF
| 138.247175 | 31.540049 | 138.247175 | 31.540049 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.451258 | 4.929043 | 1.274336 | 2.752121 | 1.477785 | null | 64 |
null |
EX3 C.8
|
UCACAGGGAGGAUAUACAUGAGGAUCACCCAUGUGAAUCUUCGACCUGCAGGUACUUUGUAGAAGGCCCAGUGG
| 1.148505 |
FMN
|
OFF
| 122.987657 | 107.084975 | 122.987657 | 107.084975 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.673623 | 4.812084 | 2.4967 | 2.635162 | 0.138461 | null | 84 |
null |
EX3 C.13
|
CGAUGCAGAGGAUAUACAUGAGGAUCACCCAUGUACCUACUCGGGCGUCCUCUUAGAUGUAGAAGGCUGACACU
| 1.150153 |
FMN
|
OFF
| 71.956414 | 62.562466 | 71.956414 | 62.562466 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 4.136166 | 4.276061 | 1.959243 | 2.099138 | 0.139895 | null | 82 |
null |
EX3 C.15
|
CCGAUACGAGGAUAUACAUGAGGAUCACCCAUGUAGUGGACCGAGCGUCGGUGUCUCAGUAGAAGGCGUUAAGA
| 1.06907 |
FMN
|
OFF
| 17.276065 | 16.159898 | 17.276065 | 16.159898 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 2.782533 | 2.849322 | 0.60561 | 0.6724 | 0.066789 | null | 120 |
null |
Exclusion 6 Mod4 of JL of Mod of Letion by ViennaUCT
|
UCAUGUCCUGAGGAUAUGUAGCGGAUAAACGCAACAGAAGGCAGGACAUGAGGAUCACCCAUGUGUGCCUUCUA
| 0.146924 |
FMN
|
OFF
| 14.190796 | 96.586119 | 14.190796 | 96.586119 | 8.819122 |
.............................................(((((x((xxxx)))))))..........
|
.........(xxxxxx(..................)xxxxx)................................
|
.........(xxxxxx(..................)xxxxx)...(((((x((xxxx)))))))..........
| 4.570435 | 2.652594 | 2.393513 | 0.475671 | -1.917841 | null | 83 |
null |
salish99_ex3_r4_026
|
UUGUUCUGAGGAUAUACAUGAGGAUCACCCAUGUGUUUCUGCUUGGUGUCUUGCGUUUGUAGAAGGCUGUUCUC
| 1.056355 |
FMN
|
OFF
| 27.99807 | 26.504409 | 27.99807 | 26.504409 | 8.819122 |
...............(((((x((xxxx)))))))........................................
|
.......(xxxxxx(.............................................)xxxxx).......
|
.......(xxxxxx((((((x((xxxx)))))))..........................)xxxxx).......
| 3.277311 | 3.332136 | 1.100389 | 1.155213 | 0.054825 | null | 720 |
null |
EX5 B.27
|
CGUUCGUGAGGAUAUUGUGGAAUUGACAUGAGGAUCACCCAUGUGGCCAUUGUCGACUCGCAAGAAGGCAUAGAUU
| 3.482912 |
FMN
|
OFF
| 188.848456 | 54.22143 | 188.848456 | 54.22143 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 3.993076 | 5.240945 | 1.816154 | 3.064023 | 1.247869 | null | 104 |
null |
EX5 B.29
|
CGGUACACAGGAUAUAACGUCUGCAACAUGAGGAUCACCCAUGUUGUCCAAACGUUGCGGUUAGAAGGGUGGGCGC
| 2.308413 |
FMN
|
OFF
| 70.772791 | 30.658634 | 70.772791 | 30.658634 | 8.819122 |
.........................(((((x((xxxx)))))))................................
|
.......(xxxxxx(...............................................)xxxxx).......
|
.......(xxxxxx(..........(((((x((xxxx)))))))..................)xxxxx).......
| 3.422914 | 4.259475 | 1.245992 | 2.082552 | 0.83656 | null | 76 |
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