Datasets:
multimolecule
/
eternabench-switch

Dataset card Data Studio Files
xet
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Search is not available for this dataset
id
float64
286
2.87k
⌀
design
stringlengths
1
92
⌀
sequence
stringlengths
74
86
activation_ratio
float64
0.02
60
ligand
stringclasses
3 values
switch
stringclasses
2 values
kd_off
float64
2.54
1.9k
kd_on
float64
2.53
1.53k
kd_fmn
float64
8.14
1.7k
⌀
kd_no_fmn
float64
8.17
1.72k
⌀
min_kd_val
float64
2.53
10.3
ms2_aptamer
stringclasses
128 values
lig_aptamer
stringclasses
59 values
ms2_lig_aptamer
stringclasses
406 values
log_kd_nolig
float64
0.93
7.45
log_kd_lig
float64
0.93
7.55
log_kd_nolig_scaled
float64
0
6.43
log_kd_lig_scaled
float64
-0.16
5.98
log_AR
float64
-3.72
4.09
folding_subscore
float64
4.86
30
⌀
num_clusters
float64
51
930
⌀
null
JR_SSNG1_Sub031
ACAUACUCUCGAGGAUAUCGUAUGGAAAAGAAACGAGAAGGCGAAUGUUAAUUUCUAAUACAUGACAUGAGGAUCACCCAUGUA
1.112494
FMN
ON
30.387622
27.314875
27.314875
30.387622
4.737167
................................................................(((((x((xxxx))))))).
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)......................(((((x((xxxx))))))).
3.414035
3.307431
1.858596
1.751992
0.106604
null
96
null
JR_SSNG1_Sub040
UCAUAAAUUCGAGGAUAUCGGUGAUAAAGAAGACGAGAAGGCGAUUAGAGAGAGAUGGUUAUAGACAUGAGGAUCACCCAUGUU
1.406643
FMN
ON
33.9274
24.119402
24.119402
33.9274
4.737167
................................................................(((((x((xxxx))))))).
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)......................(((((x((xxxx))))))).
3.524223
3.183017
1.968784
1.627577
0.341206
null
147
null
JR_ExcNG2_Sub046
CGUGUUGACGAAGGAUAUGGAUACAUGAGGAUCACCCAUGUAUAUUUUGUGAUCAUAUUUAUGAUCCAGAAGGUCGUUGACACG
2.301468
FMN
OFF
130.879376
56.867774
130.879376
56.867774
4.737167
......................(((((x((xxxx)))))))...........................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
4.040729
4.874276
2.485289
3.318837
0.833547
null
293
null
AK-NGROCr2-ExNG1-1
ACAUGAAAUCGAGGAUAUGCAAAAAAAAAAAAAGCAGAAGGCGAAAAAAAAACUCGAAAAAACAUGAGGAUCACCCAUGUAAAA
0.868687
FMN
OFF
22.952886
26.422504
22.952886
26.422504
4.737167
.............................................................(((((x((xxxx)))))))....
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)...................(((((x((xxxx)))))))....
3.274216
3.133444
1.718777
1.578004
-0.140772
null
71
null
Exclusion NG 1
UUUGGUUGUGUAGGAUAUGUGUGGCGGGCUGGCACAGAAGGACAUGAGGAUCACCCAUGUGGUUUGGGUUGGGUGGUUGGCCCG
0.817584
FMN
OFF
770.606714
942.541715
770.606714
942.541715
4.737167
.........................................(((((x((xxxx)))))))........................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
6.84858
6.647178
5.293141
5.091739
-0.201402
null
427
null
1st Go
AGGGUAGACGUAGGAUAUACGGAAUGAAUGAAAGUAGAAGGAUGACAUGAGGAUCACCCAUGUGAAAUGAAAUGAUGAAGGGUG
0.879998
FMN
OFF
509.937654
579.476232
509.937654
579.476232
4.737167
............................................(((((x((xxxx))))))).....................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)..(((((x((xxxx))))))).....................
6.362125
6.234288
4.806685
4.678849
-0.127836
null
205
null
JR_ExcNG2_Sub051Nu
AGAGAUGACGAAGGAUAUGGAUACAUGAGGAUCACCCAUGUUUAUAUAGUGAAAUUGAUUGAAUUCCAGAAGGUCGAAUAAAAG
0.789966
FMN
OFF
36.890412
46.698728
36.890412
46.698728
4.737167
......................(((((x((xxxx)))))))...........................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
3.843717
3.607952
2.288278
2.052512
-0.235765
null
100
null
JR_ExcNG3_Sub051
UACAGCGUAGAUAAUUAUGUUACAUGAGGAUCACCCAUGUCAUAGGAUAUGCAGUGGAAUACACUGCAGAAGGAUGCAUCGCUG
1.264593
FMN
OFF
18.542756
14.663018
18.542756
14.663018
4.737167
.....................(((((x((xxxx)))))))............................................
..........................................(xxxxxx(.................)xxxxx)..........
.....................(((((x((xxxx)))))))..(xxxxxx(.................)xxxxx)..........
2.685329
2.920079
1.129889
1.36464
0.234751
null
98
null
JR_ExcNG1_Sub059
AGAAAUUAGUGAGGAUAUGCAUAAUAUUUAGCUGCAGAAGGCACGGACCACAAGACAUGAGGAUCACCCAUGUGGAAUAUAGAU
1.165193
FMN
OFF
23.413141
20.093785
23.413141
20.093785
4.737167
......................................................(((((x((xxxx)))))))...........
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)............(((((x((xxxx)))))))...........
3.000411
3.153297
1.444971
1.597858
0.152887
null
162
null
JR_ExcNG2_Sub057
UUUACUUACGAAGGAUAUGGAUACAUGAGGAUCACCCAUGUAUGUAUGAUGAUCUAGUAGUUGGGCCAGAAGGUCGUGAUUAUU
1.285709
FMN
OFF
21.781835
16.941502
21.781835
16.941502
4.737167
......................(((((x((xxxx)))))))...........................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
2.829766
3.081076
1.274327
1.525637
0.25131
null
627
null
JR_SSNG2_Sub053
ACCAAUCACAUAGGAUAUAGAAUAUUAAAUUUUUACAUGAGGAUCACCCAUGUUUUAUUGGGAUACUAGAAGGAUGAGUAAUAA
1.043909
FMN
ON
112.9458
108.195035
108.195035
112.9458
4.737167
..................................(((((x((xxxx)))))))...............................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(................(((((x((xxxx)))))))..............)xxxxx)..........
4.726908
4.683935
3.171469
3.128496
0.042973
null
154
null
Same State NG3
ACAUGAGGAUCACCCAUGUUCGUCGCGUUGUGUCGCGAGUCUGAGGAUAUCGAGGUGGGUUUUGUUGAGAAGGCGGGCCCGUGU
0.856617
FMN
ON
129.463966
151.133935
151.133935
129.463966
4.737167
(((((x((xxxx))))))).................................................................
..........................................(xxxxxx(.................)xxxxx)..........
(((((x((xxxx))))))).......................(xxxxxx(.................)xxxxx)..........
4.863403
5.018166
3.307963
3.462727
-0.154764
null
515
null
Same State NG1
UGGUUGCGAGUAGGAUAUGGUGUUUUUGUUUGGUUAGAAGGGUUCGUGAUUGUGACAUGAGGAUCACCCAUGUGUGUUGUUGUU
0.90271
FMN
ON
63.64415
70.503391
70.503391
63.64415
4.737167
......................................................(((((x((xxxx)))))))...........
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)............(((((x((xxxx)))))))...........
4.153307
4.255661
2.597868
2.700221
-0.102353
null
598
null
JR_SSNG2_Sub070
UUUAUUAAACAAGGAUAUCAUUUGUGUACAAGUUUUACAUGAGGAUCACCCAUGUUAAAUGGUUUUGAGAAGGUGUUUAGAAUU
1.354675
FMN
ON
34.159708
25.216157
25.216157
34.159708
4.737167
....................................(((((x((xxxx))))))).............................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(..................(((((x((xxxx)))))))............)xxxxx)..........
3.531047
3.227485
1.975607
1.672046
0.303562
null
259
null
JR_SSNG2_Sub074Nu
AAUAGUAUUGUAGGAUAUGUUAUUUUCUAACAUGAGGAUCACCCAUGUAAUAUAGGGUUGUUUCUACAGAAGGACAAUUUAUUA
1.312534
FMN
ON
508.564947
387.467898
387.467898
508.564947
4.737167
.............................(((((x((xxxx)))))))....................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(...........(((((x((xxxx)))))))...................)xxxxx)..........
6.231593
5.959633
4.676154
4.404194
0.27196
null
195
null
Mod-Potterland
AAGAAGCACGCAGGAUAUCUCACCCAUGUAAGAAGAGAAGGGCGACAUGAGGAUCACCCAUGUCAACAUGAGGAUCACCCAUGU
1.411095
FMN
OFF
87.769241
62.199406
87.769241
62.199406
4.737167
............................................(((((x((xxxx))))))).....................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)..(((((x((xxxx))))))).....................
4.130345
4.474711
2.574906
2.919272
0.344366
null
340
null
BrourdMod 1 - Jieux - Exclusion NG1
GCAGCUAAUGCAGGAUAUCAGCACGUGUAGUGCUGAGAAGGGCACAUGAGGAUCACCCAUGUGAUCAAUUAAUAUUAAUGCUGC
6.077464
FMN
OFF
151.610868
24.946404
151.610868
24.946404
4.737167
...........................................(((((x((xxxx)))))))......................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx).(((((x((xxxx)))))))......................
3.21673
5.021317
1.66129
3.465878
1.804587
null
568
null
Thrunch 3 - Jieux - Exclusion NG 1
GCUGCAAAGUAAGGAUAUGCCUAGGAAACCUAGGCAGAAGGUACAUGAGGAUCACCCAUGUUAACGCAAAGCGAAUAAAGCAGC
1.336962
FMN
OFF
24.143217
18.058264
24.143217
18.058264
4.737167
..........................................(((((x((xxxx))))))).......................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)(((((x((xxxx))))))).......................
2.893603
3.184003
1.338164
1.628564
0.2904
null
293
null
JieuxMod 4 - Jieux - Exclusion NG 2
GCUGCAUGCAGAGGAUAUAUAACAUGAGGAUCACCCAUGUAAAAUAUAUGGAUAAACCAGAUAGUAUAGAAGGCUGCAUGCAGC
0.835428
FMN
OFF
19.152148
22.924947
19.152148
22.924947
4.737167
.....................(((((x((xxxx)))))))............................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(...(((((x((xxxx)))))))...........................)xxxxx)..........
3.132226
2.952415
1.576786
1.396976
-0.179811
null
194
null
JieuxMod 2 - Jieux - Exclusion NG 2
GCUGCAUGCAGAGGAUAUGACACAUGAGGAUCACCCAUGUAAUAAAUGAGAAUUUCGAAUGUAACUCAGAAGGCUGCAUGCAGC
3.43357
FMN
OFF
186.191205
54.226712
186.191205
54.226712
4.737167
.....................(((((x((xxxx)))))))............................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(...(((((x((xxxx)))))))...........................)xxxxx)..........
3.993174
5.226774
2.437734
3.671335
1.2336
null
232
null
JR_ExcNG1_Sub073
UGAUUUCAUGUAGGAUAUGCUUGGCGUAGCUACGCAGAAGGACAUGAGGAUCACCCAUGUUUUAGCGUCUGAGUAUAGAUUCUU
2.543594
FMN
OFF
89.71591
35.271316
89.71591
35.271316
4.737167
.........................................(((((x((xxxx)))))))........................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
3.56307
4.496648
2.007631
2.941209
0.933578
null
798
null
JR_ExcNG1_Sub080
AGUUAUCAUGUAGGAUAUGCUUGAGGUAAGAAAGCAGAAGGACAUGAGGAUCACCCAUGUUAAUGAUACAGAUUUUAGUUUCUU
6.119294
FMN
OFF
201.207069
32.880767
201.207069
32.880767
4.737167
.........................................(((((x((xxxx)))))))........................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
3.492888
5.304335
1.937449
3.748895
1.811447
null
283
null
JR_ExcNG2_Sub062
UAUUUUGAAGUAGGAUAUCAACACACAUGAGGAUCACCCAUGUUAGAUGUGGAUGUUGUAUGUUAUGAGAAGGACUUCGAUUCG
3.713735
FMN
OFF
76.434445
20.581556
76.434445
20.581556
4.737167
........................(((((x((xxxx))))))).........................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(......(((((x((xxxx)))))))........................)xxxxx)..........
3.024395
4.336433
1.468956
2.780994
1.312038
null
478
null
JR_SSNG3_Sub057
UUUUAACUACAAUUACAUGAGGAUCACCCAUGUUUUGGGAUGCAGGAUAUGUGGUAUAUUAAUUAACAGAAGGGCAAUAAUUAA
1.241363
FMN
ON
57.624954
46.420722
46.420722
57.624954
4.737167
..............(((((x((xxxx)))))))...................................................
..........................................(xxxxxx(.................)xxxxx)..........
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
4.053956
3.837746
2.498516
2.282307
0.21621
null
79
null
JR_SSNG2_Sub061
UCAUAAGAACAAGGAUAUCAAUAAAAUAUAAAUGCUACAUGAGGAUCACCCAUGUUUUAGCAUGGUGAGAAGGUGUAUUUACGG
1.593687
FMN
ON
67.792396
42.538086
42.538086
67.792396
4.737167
....................................(((((x((xxxx))))))).............................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(..................(((((x((xxxx)))))))............)xxxxx)..........
4.21645
3.7504
2.661011
2.19496
0.46605
null
178
null
JR_ExcNG3_Sub076
UGUCUGAUCUAAUAACAUGAGGAUCACCCAUGUGUUCACAACUAGGAUAUCGAUUGUUAAGAAAUCGAGAAGGAGUAUACAUUA
1.134998
FMN
OFF
50.802673
44.760126
50.802673
44.760126
4.737167
..............(((((x((xxxx)))))))...................................................
..........................................(xxxxxx(.................)xxxxx)..........
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
3.801318
3.927949
2.245878
2.37251
0.126631
null
326
null
JR_ExcNG3_Sub071
AAUCUAAUCCUUAAACAUGAGGAUCACCCAUGUAUUGGCAAGUAGGAUAUCGAUAAAUAUUUCAACGAGAAGGACUAUACAAAA
1.460587
FMN
OFF
31.694841
21.70007
31.694841
21.70007
4.737167
..............(((((x((xxxx)))))))...................................................
..........................................(xxxxxx(.................)xxxxx)..........
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
3.077315
3.456154
1.521876
1.900715
0.378838
null
135
null
Exclusion NG 3
GGUUGGUAUGAUUGGGUAUGAUACAUGAGGAUCACCCAUGUGCAGGAUAUGUUACACUCACGAUGAUAGAAGGGUAGGGUUUGA
0.886474
FMN
OFF
270.393638
305.021656
270.393638
305.021656
4.737167
......................(((((x((xxxx)))))))...........................................
..........................................(xxxxxx(.................)xxxxx)..........
......................(((((x((xxxx))))))).(xxxxxx(.................)xxxxx)..........
5.720383
5.599879
4.164943
4.044439
-0.120504
null
155
null
JR_ExcNG2_Sub066
UGAGAUGUAGUAGGAUAUCAGGUUACAUGAGGAUCACCCAUGUUAGAUUGGUGGAUAGAUGUUGAUGAGAAGGACUUUUGAGUU
1.577708
FMN
OFF
100.185933
63.500938
100.185933
63.500938
4.737167
........................(((((x((xxxx))))))).........................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(......(((((x((xxxx)))))))........................)xxxxx)..........
4.151055
4.607028
2.595615
3.051588
0.455973
null
631
null
JR_SSNG3_Sub074
ACAUGAGGAUCACCCAUGUAAUAACAUCGGUUAUACGAAAGUGAGGAUAUCGAUCAGGCAUAUUACGAGAAGGCACAAUAGGGA
0.954743
FMN
ON
41.271829
43.228204
43.228204
41.271829
4.737167
(((((x((xxxx))))))).................................................................
..........................................(xxxxxx(.................)xxxxx)..........
(((((x((xxxx))))))).......................(xxxxxx(.................)xxxxx)..........
3.72018
3.766493
2.164741
2.211054
-0.046313
null
101
null
yay
AAAUAUAAGCGAGGAUAUAUACAUGAGGAUCACCCAUGUCCCAUGUCAUGAGCAUCAGCCAUGUAGUAGAAGGCGCACAUGAGG
0.532093
FMN
OFF
53.448661
100.449811
53.448661
100.449811
4.737167
....................(((((x((xxxx))))))).............................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(..(((((x((xxxx)))))))............................)xxxxx)..........
4.609658
3.978722
3.054219
2.423282
-0.630937
null
124
null
JR_ExcNG2_Sub078
GCUAUUGGCUAAGGAUAUGGAUACAUGAGGAUCACCCAUGUAAGAAUUGUGAUCAUAUAAAUGAUCCAGAAGGUAGCUGUUAGC
1.789245
FMN
OFF
501.835629
280.473396
501.835629
280.473396
4.737167
......................(((((x((xxxx)))))))...........................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(....(((((x((xxxx)))))))..........................)xxxxx)..........
5.636479
6.218273
4.08104
4.662833
0.581794
null
389
null
salish99_ISLExNG3_028 #HINGE
ACGACAAAAGUCGAACGAUGUAGCAGAAGGACAUGAGGAUCACCCAUGUAAAAUGUAACAGCCAUGUAGGAUAUGCUACAUCGA
9.192338
FMN
OFF
288.149222
31.346673
null
null
2.533415
..............................(((((x((xxxx)))))))...................................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(((((x((xxxx))))))..................)xxxxxx)..........
3.445108
5.663478
2.51554
4.73391
2.21837
null
233
null
WHB=ISS-NG1-MS2FAR3 #bad
AUGCCUAAUGAGAAGGUGUAUAUAAAUUAUAUACAAGGAUAUCGGUCAAGCAUGAAAACAUGAGGAUCACCCAUGUUAAGGCAU
1.190159
FMN
ON
7.566481
6.357539
null
null
2.533415
.........................................................(((((x((xxxx)))))))........
..........(xxxxx(.................)xxxxxx)..........................................
..........(xxxxx(.................)xxxxxx)...............(((((x((xxxx)))))))........
2.023728
1.849641
1.09416
0.920073
0.174087
null
78
null
salish99_InSLSSNG1_001 #endbits investigation
AGUGUCAUCGAGAAGGCCUCAACAUGAGGAUCACCCAUGUUGUAAUAUGGGAGGAUAUCGAUGAUACAGCUACGUUUCGUAGCU
3.345876
FMN
ON
18.893116
5.646687
null
null
2.533415
.....................(((((x((xxxx)))))))............................................
..........(xxxxx(.................................)xxxxxx)..........................
..........(xxxxx(....(((((x((xxxx)))))))..........)xxxxxx)..........................
2.938798
1.731069
2.009229
0.801501
1.207729
null
268
null
salish99_ISLSSNG3_101 #TRIPLE endbits investigation
UUUUACGUUUCGUAGCAGUGUCAUCGAGAAGGCCCUGACAUGAGGAUCACCCAUGUUGUUACAUGGGAGGAUAUCGAUGAUAAA
2.761824
FMN
ON
15.8834
5.751054
null
null
2.533415
.....................................(((((x((xxxx)))))))............................
..........................(xxxxx(.................................)xxxxxx)..........
..........................(xxxxx(....(((((x((xxxx)))))))..........)xxxxxx)..........
2.765275
1.749383
1.835706
0.819815
1.015891
null
151
null
ISL-E-NG1_65
UGCAUGUAUGAGAAGGCUAAUUUGGACAUUAUUUAUGAUGAUGUUUAGGUUAGAGGAUAUUGGGACAUGAGGAUCACCCAUGUA
0.834124
FMN
OFF
17.95917
21.530584
null
null
2.533415
................................................................(((((x((xxxx))))))).
..........(xxxxx(...................................)xxxxxx)........................
..........(xxxxx(...................................)xxxxxx)....(((((x((xxxx))))))).
3.069474
2.888101
2.139906
1.958533
-0.181374
null
237
null
salish99_SLSSNG3_017 #HINGE
AGCUACGUUUCGUAGCAGCUAGGUGAGGAUAUUAAAAUUUUCACAUGAGGAUCACCCAUGUAUGUGAAGAAGGCGCCUAGAAAG
6.922618
FMN
ON
53.732496
7.761875
null
null
2.533415
..........................................(((((x((xxxx))))))).......................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(..........(((((x((xxxx)))))))......)xxxxx)..........
3.984018
2.049224
3.05445
1.119656
1.934794
null
121
null
salish99_ISLExNG1_x116 #HINGE
AGAAACUACGAGAAGGACAUGUGGUCCUUCAGUUACAUGAGGAUCACCCAUGUAGGAUAUAAAAGUUUCAGGAUCGUGAGAUCA
1.04808
FMN
OFF
7.104546
6.778631
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxx(...................................)xxxxxx)........................
..........(xxxxx(.................(((((x((xxxx)))))))xxxxxx)........................
1.913775
1.960735
0.984207
1.031167
0.04696
null
196
null
JR #DistanceFar #Hairpin #Static #Noisy #NP SLSSNG3 Sub062
CCCAAACUUGGGCUUGGUGGUGCAUAGGAUAUGCUUGAACAUGAGGAUCACCCAUGUACAACUGUGCAGAAGGGUGCAGGGCAA
2.19735
FMN
ON
40.909315
18.617565
null
null
2.533415
......................................(((((x((xxxx)))))))...........................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)..........
3.711358
2.924106
2.78179
1.994537
0.787252
null
184
null
Sara'sguidence_#HighScoreProbStacks#7
AUGGAUGUCACAGGAUAUGCUAUGGAUACCAUAGCAGAAGGGUGAUCCAUCCUAUGUAAAUACAUGAGGAUCACCCAUGUAUCC
1.519036
FMN
ON
111.820181
73.612576
null
null
2.533415
.............................................................(((((x((xxxx)))))))....
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)...................(((((x((xxxx)))))))....
4.716892
4.298816
3.787324
3.369248
0.418076
null
177
null
WHB=IEX-NG3-MS2FAR1 #bad
AGGAACAUGAGGAUCACCCAUGUUAGAGACCUCAUGCGAUGUAGAAGGAUAAUCCGAGAAGAGGUAUAGGAUAUACAUGAGAAA
0.822924
FMN
OFF
171.343161
208.2125
null
null
2.533415
....(((((x((xxxx))))))).............................................................
..........................................(xxxxx(.................)xxxxxx)..........
....(((((x((xxxx)))))))...................(xxxxx(.................)xxxxxx)..........
5.338559
5.143668
4.408991
4.2141
-0.194891
null
129
null
JR #DistanceFar #Hairpin #NP SLSSNG3 Sub067
CGCAAAGAUGGGUUUAAUGGAGCAUAGGAUAUGCUUGUACAUGAGGAUCACCCAUGUAAUAUUGUGCAGAAGGGUGCAUUUGCG
3.944098
FMN
ON
293.010401
74.290845
null
null
2.533415
......................................(((((x((xxxx)))))))...........................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)..........
5.680208
4.307988
4.75064
3.37842
1.37222
null
57
null
JR #DistanceClose #StaticP #NP InvSLSSNG3 Sub075
GCGUAUUAGGUGUAGCUAGUCAUUCAAGAAGGGUGAAGAACAUGAGGAUCACCCAUGUAGUUUAUACAGGAUAUUGAUAUACGC
2.248823
FMN
ON
528.41587
234.974427
null
null
2.533415
.......................................(((((x((xxxx)))))))..........................
..........................(xxxxx(.................................)xxxxxx)..........
..........................(xxxxx(......(((((x((xxxx)))))))........)xxxxxx)..........
6.269884
5.459477
5.340315
4.529908
0.810407
null
175
null
JR #DistanceFar #Static InvSLSSNG3 Sub064
UUCGCUAAGGUGUAGCGAGACUUGCAAGAAGGGUGAAGAACAUGAGGAUCACCCAUGUAAGCCUUACAGGAUAUUGCUUGACGA
2.921017
FMN
ON
106.243951
36.372251
null
null
2.533415
.......................................(((((x((xxxx)))))))..........................
..........................(xxxxx(.................................)xxxxxx)..........
..........................(xxxxx(......(((((x((xxxx)))))))........)xxxxxx)..........
4.665738
3.593806
3.73617
2.664238
1.071932
null
149
null
Inv SL ExNG3
GCGUCAGAAUUAAUUGUGACAGGCAGAAGGCCAUAUUUCAUGUCAGACAUGAGGAUCACCCAUGUGGAGGAUAUGCAGUUACAC
2.272721
FMN
OFF
98.708538
43.431881
null
null
2.533415
..............................................(((((x((xxxx)))))))...................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(...............(((((x((xxxx))))))).)xxxxxx)..........
3.771194
4.592171
2.841626
3.662603
0.820978
null
197
null
#StaticStemDeletion - salish99-SS2_33_005
CAGCGAUAGCUGAACAAUCUAUCUGAGGAUAUCAUGAAUAAACAUGAGGAUCACCCAUGUAAAUAUGAGAAGGCAGAUAGAUUG
1.00855
FMN
ON
4.823293
4.782404
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(.........(((((x((xxxx))))))).......)xxxxx)..........
1.573457
1.564943
0.643889
0.635375
0.008513
null
129
null
Inv SL EXNG1 08
CUGCCGUAGGAGAAGGACGGCGGGUUAUUUUUGUACAUGAGGAUCACCCAUGUAGGAUAUCCUACGUCAGGCGACCUACUACAG
1.0463
FMN
OFF
34.47642
32.950791
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxx(...................................)xxxxxx)........................
..........(xxxxx(.................(((((x((xxxx)))))))xxxxxx)........................
3.495015
3.540276
2.565447
2.610707
0.04526
null
177
null
Inv SL EXNG1 11
GUUAUUGACAAGAAGGCAUACAUGAGGAUCACCCAUGUUCUACAUGGAUAAUGAGGAUAUUGCCAAUACAUGAGGAUCACCCAG
1.133694
FMN
OFF
77.456185
68.321924
null
null
2.533415
...................(((((x((xxxx)))))))..............................................
..........(xxxxx(...................................)xxxxxx)........................
..........(xxxxx(..(((((x((xxxx)))))))..............)xxxxxx)........................
4.224231
4.349712
3.294663
3.420144
0.125482
null
138
null
WHB=ISS-NG2-MS2FAR1 #bad
ACUAUAUAUGAGAAGGUGAAGUGGAAACAUGAGGAUCACCCAUGUAAUACGAAGCGUAUUUUUAUCAAGGAUAUCAUAUAUAGA
1.276146
FMN
ON
10.236033
8.02105
null
null
2.533415
..........................(((((x((xxxx))))))).......................................
..........(xxxxx(.................................................)xxxxxx)..........
..........(xxxxx(.........(((((x((xxxx))))))).....................)xxxxxx)..........
2.325914
2.082069
1.396346
1.152501
0.243845
null
104
null
JR #DistanceClose #Static #StaticP #NP InvSSNG2 Sub066
CACGGAUAGUAGAAGGGUGACAUGAGGAUCACCCAUGUACUUAUGUAGGUAUUACUAUAUAAUUCACAGGAUAUACUAUCCGUG
8.795635
FMN
ON
794.134788
90.287378
null
null
2.533415
...................(((((x((xxxx)))))))..............................................
..........(xxxxx(.................................................)xxxxxx)..........
..........(xxxxx(..(((((x((xxxx)))))))............................)xxxxxx)..........
6.677253
4.502998
5.747685
3.573429
2.174256
null
166
null
Inv Small Loop Ecxl NG3 cac19
AUCUAAGAAUUAAUUGUGACAGUGAGAAGGCUAUAGUUUGUGACCGACAUGAGGAUCACCCAUGUAGAGGAUAUCACUAGCUAC
6.335418
FMN
OFF
252.997247
39.933792
null
null
2.533415
..............................................(((((x((xxxx)))))))...................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(...............(((((x((xxxx))))))).)xxxxxx)..........
3.687223
5.533379
2.757655
4.60381
1.846156
null
150
null
Inv Small Loop Ecxl NG3 cac26
AGGUAAGACUUAAUUGUGCUGGUGAGAAGGCAAAUGGUUGUGAUUAACAUGAGGAUCACCCAUGUUGAGGAUAUCAUCGGUAUC
0.125814
FMN
OFF
62.920887
500.111037
null
null
2.533415
..............................................(((((x((xxxx)))))))...................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(...............(((((x((xxxx))))))).)xxxxxx)..........
6.21483
4.141878
5.285262
3.21231
-2.072952
null
197
null
Inv SL ExNG3 19
CUGUGACGGUGCGCAAGUGGACGUAGAAGGGUCACAUGAGGAUCACCCAUGUGGGCCUGCGAGUGACAGGAUAUACGUUCGUGC
3.79922
FMN
OFF
57.005146
15.004435
null
null
2.533415
.................................(((((x((xxxx)))))))................................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(..(((((x((xxxx)))))))..............)xxxxxx)..........
2.708346
4.043142
1.778778
3.113573
1.334796
null
317
null
HI HULLO HUG
AUGUGGUGCGUAGGAUAUCAUUGAGGGUCACCCUGAGAAGGACGUGAGGACAUGAGGAUCACCCAUGUGGAUCACCCAUGUCAU
1.176808
FMN
OFF
288.317655
244.999798
null
null
2.533415
.................................................(((((x((xxxx)))))))................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx).......(((((x((xxxx)))))))................
5.501257
5.664063
4.571689
4.734495
0.162805
null
338
null
Default title
GAGUAGAAGUUAGGAUAUUGGAUAGGGACGGAAUAAGAAGGAGCAAGACAUGAGGAUCACCCAUGUGUAGAAGAAGAGAUCCUC
0.37611
FMN
OFF
168.440184
447.847611
null
null
2.533415
...............................................(((((x((xxxx)))))))..................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx).....(((((x((xxxx)))))))..................
6.104453
5.126581
5.174885
4.197012
-0.977872
null
105
null
D3-PAT'sLook_#HighScoreProbStacks#4
UUGCCUCAGAACAUGAGGAUCACCCAUGUGCUGCGGGCAACGUAGGAUAUGAUGGUAUGAUACCGUCAGAAGGAUGAUGGUACC
1.102138
FMN
ON
5.858709
5.315768
null
null
2.533415
..........(((((x((xxxx))))))).......................................................
..........................................(xxxxxx(.................)xxxxx)..........
..........(((((x((xxxx))))))).............(xxxxxx(.................)xxxxx)..........
1.767929
1.670678
0.838361
0.741109
0.097252
null
285
null
Sara'sEyes_#HighScoreProbStacks#20
GUGAAGAUAGCAGGAUAUAUAUUUCCUACAUGAGGAUCACCCAUGUAGGUGAUCAGCCGAGUAAAGUAGAAGGGCUAUCUUUAC
1.510412
FMN
ON
16.137098
10.683905
null
null
2.533415
...........................(((((x((xxxx)))))))......................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(.........(((((x((xxxx))))))).....................)xxxxx)..........
2.781121
2.368738
1.851553
1.43917
0.412382
null
203
null
salish99_ExNG1_213 #endbits investigation
CCACGGUAUGUAGGAUAUGCAUAGCAUUGCUAUGCAGAAGGACAUGAGGAUCACCCAUGUAUGUAUUCCAUACUAAUCCCGUGA
0.889528
FMN
OFF
5.301702
5.960132
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
1.785093
1.668028
0.855524
0.73846
-0.117065
null
170
null
#StaticStemDeletion - Xeonanis 75 9
CAGCGAUAGCUGAACAAUCUAUCUGAGGAUAUUCAUAUAAAACAUGAGGAUCACCCAUGUAAUUGGGAGAAGGCAGAUAGAUUG
3.65748
FMN
ON
22.349659
6.110672
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(.........(((((x((xxxx))))))).......)xxxxx)..........
3.106811
1.810037
2.177243
0.880469
1.296774
null
112
null
#StaticStemDeletion - JL SNG1 3.00 18
CAGCGAUAGCUGAAUGGUACAUGGGAGGAUAUGGGUUACAUGAGGAUCACCCAUGUUAAAUAAUACUAGAAGGCCCAUGUACCU
3.623786
FMN
ON
16.483027
4.548565
null
null
2.533415
.....................................(((((x((xxxx)))))))............................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(.....(((((x((xxxx)))))))...........)xxxxx)..........
2.802331
1.514812
1.872763
0.585243
1.287519
null
255
null
Inv Small Loop Excl NG3 cac2
CCCACGAAAGUCGAACGAUGUAGGAGAAGGACAAUAACAUGACAUGAGGAUCACCCAUGUGCCAUGUAGGAUAUCCUACAUGGG
0.989871
FMN
OFF
7.779725
7.859332
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(..........(((((x((xxxx)))))))......)xxxxxx)..........
2.061702
2.051521
1.132133
1.121953
-0.010181
null
114
null
Copied & Modified
GCGGGUAAAGCAGGAUAUCUAAUGUCACGGAAACAUGAGGAUCACCCAUGUAGAGAAGGGCUAAGUCAUACAAUUCGAAUUUGC
0.911017
FMN
OFF
8.237295
9.041863
null
null
2.533415
................................(((((x((xxxx))))))).................................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(..............(((((x((xxxx)))))))..)xxxxx)........................
2.201865
2.108672
1.272297
1.179104
-0.093193
null
148
null
salish99_ExNG1_101 #endbits investigation
AUCCGGCGUGUAGGAUAUGGAUCCGAUUAGGAUCCAGAAGGACAUGAGGAUCACCCAUGUACAUGUAAACAGUCAUCACCGGAU
2.128559
FMN
OFF
14.019592
6.586424
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)((((x((xxxx)))))).........................
1.88501
2.640456
0.955442
1.710888
0.755445
null
173
null
JR #MainLoop #Static #NP InvSSNG2 Sub051
UGCUAAUUGUAGAAGGGUGACAUGAGGAUCACCCAUGUUCACAUGCGAUUUACGGCGCAUGUUCCACAGGAUAUACAGUUGAGU
5.679518
FMN
ON
341.64389
60.153676
null
null
2.533415
...................(((((x((xxxx)))))))..............................................
..........(xxxxx(.................................................)xxxxxx)..........
..........(xxxxx(..(((((x((xxxx)))))))............................)xxxxxx)..........
5.833769
4.096903
4.904201
3.167334
1.736866
null
141
null
JR #DistanceClose #Static #StaticP #NP InvSSNG2 Sub057
AUCGGAUUGUAGAAGGGUGACAUGAGGAUCACCCAUGUUCAAAUGCGUUUUUCGGUAAUUGUUCCACAGGAUAUACUGUCCGAG
4.85656
FMN
ON
675.125074
139.013015
null
null
2.533415
...................(((((x((xxxx)))))))..............................................
..........(xxxxx(.................................................)xxxxxx)..........
..........(xxxxx(..(((((x((xxxx)))))))............................)xxxxxx)..........
6.514898
4.934568
5.58533
4.004999
1.58033
null
236
null
Inv Small Loop Ecxl NG3 cac18
CACAAGAAAGUCGAACCGCUAUCUAGAAGGACAACAUGACAACAUGAGGAUCACCCAUGUCAUAUGUAGGAUAUGGAUGGUGGG
1.022446
FMN
OFF
9.140646
8.939977
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(..........(((((x((xxxx)))))))......)xxxxxx)..........
2.190533
2.212731
1.260965
1.283163
0.022198
null
116
null
Inv Small Loop Excl NG3 cac9
CACAAGAAAGUCGAAGGUUGAAGUAGAAGGUUUAUAACAUGACAUGAGGAUCACCCAUGUGCCAAGAAGGAUAUGCUUUAAUCG
0.827857
FMN
OFF
9.428924
11.389561
null
null
2.533415
.........................................(((((x((xxxx)))))))........................
........................(xxxxx(...................................)xxxxxx)..........
........................(xxxxx(..........(((((x((xxxx)))))))......)xxxxxx)..........
2.432697
2.243782
1.503129
1.314214
-0.188915
null
173
null
#StaticStemDeletion - Mat - Exclusion 2 - Eli Mod - D4
UCAGUAGAGUCAGGAUAUACGAAAGGCGAUCCAUACAUGAGGAUCACCCAUGUAGAAGGGACUCUACUGUAAGUCGGAAACGAC
0.070696
FMN
OFF
21.862295
309.245577
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
5.734136
3.084763
4.804568
2.155195
-2.649372
null
81
null
S-loop ExNG3 01
UGAUCGAGAGAUCUUAGAUUCUGGUAGGAUAUACAACAGUUGCGCUUUACAUGAGGAUCACCCAUGUAGAAGGACUAGAGUCUA
1.162187
FMN
OFF
8.778493
7.553425
null
null
2.533415
................................................(((((x((xxxx))))))).................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(................(((((x((xxxx))))))))xxxxx)..........
2.022001
2.172305
1.092433
1.242737
0.150304
null
183
null
S-loop ExNG3 11
UGGACCGAGCUGUCGGUUGGCUCUUAGGAUAUGACAUGAGGAUCACCCAUGUGGGAUCUAAAUUGUCAGAAGGAGGGUUCUGGG
0.834918
FMN
OFF
40.328985
48.302945
null
null
2.533415
.................................(((((x((xxxx)))))))................................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(.(((((x((xxxx)))))))...............)xxxxx)..........
3.877493
3.69707
2.947924
2.767502
-0.180422
null
64
null
IX-NG1_55
CCUCAGAACAAGAAGGUGGGAGAAGAGUAUAACUAAGGAUAUUGAAAGGGAUGAACAUGAGGAUCACCCAUGUAAGGAAUCGUG
0.773498
FMN
OFF
40.871134
52.839346
null
null
2.533415
......................................................(((((x((xxxx)))))))...........
..........(xxxxx(.................)xxxxxx)..........................................
..........(xxxxx(.................)xxxxxx)............(((((x((xxxx)))))))...........
3.967256
3.710424
3.037688
2.780856
-0.256832
null
132
null
S-loop ExNG1 20
UUAUGUCGCGUAGGAUAUCACUAGUGUUGUAAUUUAAUUGUAAUUACGAUGUGAGAAGGACGUACACAUGAGGAUCACCCAUGU
0.796677
FMN
OFF
16.194154
20.327117
null
null
2.533415
.................................................................(((((x((xxxx)))))))
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(...................................)xxxxx).....(((((x((xxxx)))))))
3.011956
2.78465
2.082388
1.855082
-0.227306
null
290
null
S-loop ExNG1 01
UGAUAGGACAGAGGAUAUACGUAUAGUUACCUCUACAUGAGGAUCACCCAUGUAGAAGGCUGUCCUAUCUAAGUCGGAAACGAC
1.212535
FMN
OFF
5.778641
4.765751
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
1.561455
1.754169
0.631887
0.8246
0.192713
null
176
null
WHB-IEX-NG1-MS2toclose10 #bad
GGGCCGUAGUAGAAGGGAUAUACGAUAGGUAUAUCAGGAUAUACAUGAGGAUCACCCAUGUUCUAACAGUGAUGGUCCUCCCUA
2.159506
FMN
OFF
373.580742
172.993609
null
null
2.533415
..........................................(((((x((xxxx))))))).......................
..........(xxxxx(.................)xxxxxx)..........................................
..........(xxxxx(.................)xxxxxx)(((((x((xxxx))))))).......................
5.153255
5.923134
4.223686
4.993566
0.76988
null
115
null
IX-NG2_35
UGAUGAGGUUAGAAGGUACAGAGUAGUGGACCAAACAUGAGGAUCACCCAUGUCAUGGGAGGGAGUAAGGAUAUAAAGUUGUAG
0.803285
FMN
OFF
51.169036
63.699743
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxx(.................................................)xxxxxx)..........
..........(xxxxx(.................(((((x((xxxx))))))).............)xxxxxx)..........
4.154181
3.935135
3.224612
3.005566
-0.219046
null
229
null
SL-X-NG3_5
UGUGACAUGAGGAUCACCCAUGUAGAGGAUAUAGAGAUGAUGUUAGAGAAGAAUGUGUAGUAAGACUAGAAGGCUAUGUGUGUA
0.859781
FMN
OFF
28.205648
32.805616
null
null
2.533415
....(((((x((xxxx))))))).............................................................
........................(xxxxxx(...................................)xxxxx)..........
....(((((x((xxxx))))))).(xxxxxx(...................................)xxxxx)..........
3.4906
3.339522
2.561032
2.409954
-0.151077
null
253
null
SL SstateNG3 01
CGGCCGCUACGCCGGCUCGACGCACAGGAUAUGCAGUUACAUGAGGAUCACCCAUGUGGCCAUGUGCAGAAGGGUGAUUCGCGA
3.108562
FMN
ON
135.423591
43.5647
null
null
2.533415
......................................(((((x((xxxx)))))))...........................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)..........
4.908408
3.774247
3.978839
2.844679
1.13416
null
154
null
SL-SS-NG1_25
GAGAAGAGUAUAGGAUAUUAAGAAACAUGAGGAUCACCCAUGUAGUGAGUGUGAGAAGGGUAGGAGGUGGUAGGAGGAUCCAGG
1.358175
FMN
ON
22.329819
16.441051
null
null
2.533415
........................(((((x((xxxx))))))).........................................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(......(((((x((xxxx)))))))..........)xxxxx)........................
3.105923
2.799781
2.176355
1.870213
0.306142
null
77
null
SL SstateNG3 11
ACAUGAGGAUCACCCAUGUUAAAUGAGGAUAUAUGACUGCACAUGAGGUUCACCCAUGUUCUACCGUAGAAGGUAUAAAUAAUU
0.941732
FMN
ON
71.681088
76.11626
null
null
2.533415
(((((x((xxxx))))))).................................................................
........................(xxxxxx(...................................)xxxxx)..........
(((((x((xxxx))))))).....(xxxxxx(...................................)xxxxx)..........
4.272227
4.332262
3.342659
3.402694
-0.060035
null
132
null
AtrosYaY3
UAUAUUUUUAUAGGAUAUGGAUAUGAUGCAUAUCCAGAAGGGUGAUUAUAAUAUAAUCUAUACAUGAGGAUCACCCAUGUUUAU
3.369014
FMN
ON
242.46009
71.967666
null
null
2.533415
.............................................................(((((x((xxxx)))))))....
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)...................(((((x((xxxx)))))))....
5.490837
4.276217
4.561269
3.346649
1.21462
null
144
null
SL-X-NG1_35
AGAGUUGACUCAGGAUAUACGGGAAUGUGCCGCGACAUGAGGAUCACCCAUGUAGAAGGGAGAGAGAAGAAGAGAUGUAGAAGA
0.96201
FMN
OFF
53.998277
56.130682
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
4.027683
3.988952
3.098114
3.059384
-0.03873
null
73
null
S-loop S-stateNG1 20
ACUAAGGAGGUAGGAUAUUGUGUGGUGGCCGGGCUCCCACGGCGAGCGGCACAAGAAGGAUCCCAACAUGAGGAUCACCCAUGU
1.871894
FMN
ON
48.877525
26.111269
null
null
2.533415
.................................................................(((((x((xxxx)))))))
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(...................................)xxxxx).....(((((x((xxxx)))))))
3.889318
3.262367
2.959749
2.332799
0.626951
null
210
null
SL-SS-NG3_40
GGACAUGGGAAACCACAUGGAGAUAAGGAUAUAUAGAUGACAUGAGGAUCACCCAUGUAUGGCGAAUAGAAGGUAUGAGUGUGA
9.397985
FMN
ON
152.742187
16.252653
null
null
2.533415
.......................................(((((x((xxxx)))))))..........................
........................(xxxxxx(...................................)xxxxx)..........
........................(xxxxxx(.......(((((x((xxxx))))))).........)xxxxx)..........
5.028751
2.788256
4.099183
1.858688
2.240495
null
92
null
IX-NG3_5
GGGUACAUGAGGAUCACCCAUGUAACGUGGAUAAGCUAUAAUAGAAGGAUAAGAGGAGAUGAGGUAUAGGAUAUAUCAUGGGUG
0.400847
FMN
OFF
17.096914
42.651947
null
null
2.533415
....(((((x((xxxx))))))).............................................................
..........................................(xxxxx(.................)xxxxxx)..........
....(((((x((xxxx)))))))...................(xxxxx(.................)xxxxxx)..........
3.753073
2.838898
2.823505
1.90933
-0.914175
null
153
null
S-loop S-stateNG1 01
UCAUUUAUUACAGGAUAUAUUAGUAUACAGUUGUUUGGUUAUUACAUAUUAAUAGAAGGGUAGAACAUGAGGAUCACCCAUGUA
1.965323
FMN
ON
234.045053
119.087321
null
null
2.533415
................................................................(((((x((xxxx))))))).
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(...................................)xxxxx)....(((((x((xxxx))))))).
5.455514
4.779857
4.525945
3.850289
0.675657
null
153
null
Denovo 15
UAAAAGACUAGCUGGUAUCUCCACAUGAGGAUCACCCAUGUCUAGGAUAUGAGCAGCAAAGCUGCUUAGAAGGAGACGCUAGUC
1.151711
FMN
OFF
8.830997
7.667717
null
null
2.533415
......................(((((x((xxxx)))))))...........................................
..........................................(xxxxxx(.................)xxxxx)..........
......................(((((x((xxxx))))))).(xxxxxx(.................)xxxxx)..........
2.037019
2.178268
1.107451
1.2487
0.141249
null
203
null
#HiddenHairpinInALoopBoosted - Mat - Same State NG 1 - JL mod - D3
GCCAUCGCAUGAGGAUAUGCUCCCGUUUCGGGAGCAGAAGGCAUGUCGUAAGACAUGAGGAUCACCCAUGUAGUUAAGAUGGCA
14.350674
FMN
ON
854.677972
59.556642
null
null
2.533415
....................................................(((((x((xxxx))))))).............
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)..........(((((x((xxxx))))))).............
6.750725
4.086928
5.821157
3.15736
2.663797
null
155
null
JR #MainLoop #NP SSNG3 Sub062
UAAUGUGACAUGAGGAUCACCCAUGUAGACAUGGGAAGGUCGUAGGAUAUGCUGAUGAUUUUUUUGCAGAAGGACGUCAAGGAG
1.937958
FMN
ON
268.114218
138.348797
null
null
2.533415
.......(((((x((xxxx)))))))..........................................................
..........................................(xxxxxx(.................)xxxxx)..........
.......(((((x((xxxx)))))))................(xxxxxx(.................)xxxxx)..........
5.591413
4.929778
4.661845
4.00021
0.661635
null
123
null
JR #DistanceFar #Hairpin #Noisy #NP SSNG3 Sub067
CGCUAUUACAUGAGGAUCACCCAUGUAUAUAUUGUAUUUUCGUAGGAUAUGCAGAAGAUUAAAGUGCAGAAGGACGUAAUAGCG
3.895072
FMN
ON
29.138341
7.480823
null
null
2.533415
.......(((((x((xxxx)))))))..........................................................
..........................................(xxxxxx(.................)xxxxx)..........
.......(((((x((xxxx)))))))................(xxxxxx(.................)xxxxx)..........
3.372055
2.012343
2.442487
1.082775
1.359712
null
80
null
salish99_SLSSNG1_001 #endbits investigation
AGUUAAUAUCGAGGAUAUGUCUAGACACAUGAGGAUCACCCAUGUAUGUGUAUAGAAGGCGAUAUUAACAGCAUGUUACAUGCU
2.610923
FMN
ON
42.920594
16.438859
null
null
2.533415
..........................(((((x((xxxx))))))).......................................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(........(((((x((xxxx)))))))........)xxxxx)........................
3.759352
2.799648
2.829784
1.87008
0.959704
null
168
null
#MS2NeighbourBaseDeletion - Eli xng 2.01
UGAUAGGACAGAGGAUAUACGUGCUAGAGAUACUAGCAAAAUUUCCUAACAUGAGGAUCACCCAUGUAGAAGGCUGUCCUAUCU
2.108757
FMN
OFF
14.185283
6.726846
null
null
2.533415
................................................(((((x((xxxx))))))).................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(..............................(((((x((xxxx))))))))xxxxx)..........
1.906106
2.652205
0.976538
1.722637
0.746099
null
252
null
#MS2NeighbourBaseDeletion - BrourdMod - Jieux - Exclusion NG 2
GUCAGCUCGUGAGGAUAUACAACACUGCUUCGGCAGUGUAUUAAGAUAACAUGAGGAUCACCCAUGUAGAAGGCACGAGCUGAU
1.519401
FMN
OFF
8.476999
5.579171
null
null
2.533415
................................................(((((x((xxxx))))))).................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(..............................(((((x((xxxx))))))))xxxxx)..........
1.71904
2.137357
0.789472
1.207788
0.418316
null
214
null
#InverseAptamerRotation - Ex NG2 #81
AAAUAAAGCAGUGUGGUAAGAUCACAUGAGGAUCACCCAUGUAAGGAUAUCUGUCCUAAAAGGACAGAGAAGGUACGUCACUGC
4.211293
FMN
OFF
79.64393
18.911989
null
null
2.533415
.......................(((((x((xxxx)))))))..........................................
..........................................(xxxxxx(.................)xxxxx)..........
.......................(((((x((xxxx)))))))(xxxxxx(.................)xxxxx)..........
2.939796
4.377566
2.010228
3.447998
1.43777
null
189
null
#InverseAptamerRotation - BrourdMod 7 - Jieux - Exclusion NG2
UAAUAAAGCAGUGUAUUAAGAUCACAUGAGGAUCACCCAUGUAAGGAUAUGAGCAGAAAAUCUGCUCAGAAGGUACGAACACUG
3.405
FMN
OFF
32.396165
9.514292
null
null
2.533415
.......................(((((x((xxxx)))))))..........................................
..........................................(xxxxxx(.................)xxxxx)..........
.......................(((((x((xxxx)))))))(xxxxxx(.................)xxxxx)..........
2.252795
3.47804
1.323227
2.548472
1.225245
null
218
null
#lol
UUUGUUUGCGGAGGAUAUAUAAGUGGAUCACCCAUAGAAGGCCGACAUGAGGAUCACCCAUGUUAGACAUGAGGAUCACCCAUG
1.369391
FMN
OFF
139.520823
101.885311
null
null
2.533415
............................................(((((x((xxxx))))))).....................
..........(xxxxxx(.................)xxxxx)..........................................
..........(xxxxxx(.................)xxxxx)..(((((x((xxxx))))))).....................
4.623848
4.938214
3.69428
4.008646
0.314366
null
118
null
Inv S-state NG3 01
GCGUAACAUGAGGAUCACCCAUGUGCCCGAGAAUUCGGGCCGAGAAGGGUGACCGGUCGUAUGGCACAGGAUAUCGACGUUGUG
2.279898
FMN
ON
30.54736
13.398562
null
null
2.533415
.....(((((x((xxxx)))))))............................................................
..........................................(xxxxx(.................)xxxxxx)..........
.....(((((x((xxxx)))))))..................(xxxxx(.................)xxxxxx)..........
3.419278
2.595147
2.48971
1.665579
0.824131
null
140
null
#StaticStemDeletion - Ex NG2 #81
AUCAGCUCGUCAGGAUAUACGUAAUGGUAAGAUCACAUGAGGAUCACCCAUGUAGAAGGGACGAGCUGAUAAGCACGAAAGUGC
3.527585
FMN
OFF
676.115582
191.665266
null
null
2.533415
..................................(((((x((xxxx)))))))...............................
..........(xxxxxx(...................................)xxxxx)........................
..........(xxxxxx(................(((((x((xxxx))))))))xxxxx)........................
5.25575
6.516364
4.326182
5.586796
1.260614
null
120
null
X-NG2_30
UGGAAGAGAAGAGGAUAUCCGUAGAUAACACAUGAGGAUCACCCAUGUAAGAGGGAUAGGUGAUAGGAGAAGGCUUAGAGAGGU
0.98019
FMN
OFF
14.940729
15.242684
null
null
2.533415
.............................(((((x((xxxx)))))))....................................
..........(xxxxxx(.................................................)xxxxx)..........
..........(xxxxxx(...........(((((x((xxxx)))))))...................)xxxxx)..........
2.7241
2.704091
1.794531
1.774523
-0.020009
null
274
null
X-NG3_15
GAAUGGGUAGAAGGACAUGAGGAUCACCCAUGUAGUGUGACUAAGGAUAUUAGAGAAGAUUGACGUAAGAAGGUAGAUGUGAGG
0.866857
FMN
OFF
116.556106
134.458306
null
null
2.533415
..............(((((x((xxxx)))))))...................................................
..........................................(xxxxxx(.................)xxxxx)..........
..............(((((x((xxxx))))))).........(xxxxxx(.................)xxxxx)..........
4.901254
4.758373
3.971686
3.828805
-0.142881
null
159