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--- |
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language: rna |
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tags: |
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- Biology |
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- RNA |
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license: |
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- agpl-3.0 |
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size_categories: |
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- 100K<n<1M |
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source_datasets: |
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- multimolecule/pdb |
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task_categories: |
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- text-generation |
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- fill-mask |
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task_ids: |
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- language-modeling |
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- masked-language-modeling |
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pretty_name: pdb-rna_secondary_structure |
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library_name: multimolecule |
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--- |
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# pdb-rna_secondary_structure |
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> [!IMPORTANT] |
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> The pdb-rna_secondary_structure dataset is in beta test. |
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> This dataset card may not accurately reflects the data content. |
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> The data content and this dataset card may subject to change. |
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> |
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> Please contact the MultiMolecule team on GitHub issues should you have any feedback. |
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> [!CAUTION] |
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> This dataset is converted from the dataset released by the authors of SPOT-RNA. |
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> The MultiMolecule is aware of a potential issue in data quality. |
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> We are working on cleaning the dataset. |
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RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of: |
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- Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive |
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- Computed Structure Models (CSM) from AlphaFold DB and ModelArchive |
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The PDB-rna_secondary_structure is a subset of the PDB dataset focusing on the secondary structure of RNA. |
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## Disclaimer |
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This is an UNOFFICIAL release of the RNA Secondary Structure data in the [Protein Data Bank](https://www.rcsb.org). |
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**The team releasing Protein Data Bank did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.** |
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## Dataset Description |
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- **Homepage**: https://multimolecule.danling.org/datasets/pdb-rna_secondary_structure |
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- **datasets**: https://huggingface.co/datasets/multimolecule/pdb-rna_secondary_structure |
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- **Point of Contact**: [RCSB PDB](https://www.rcsb.org/pages/contactus) |
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## Example Entry |
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| id | sequence | secondary_structure | |
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| -------- | ----------------------------------- | -------------------------------- | |
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| 1c0a-1-B | GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGC... | (((((((([{{[[)<..AB).)]]}}(((... | |
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## License |
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This dataset is licensed under the [AGPL-3.0 License](https://www.gnu.org/licenses/agpl-3.0.html). |
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```spdx |
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SPDX-License-Identifier: AGPL-3.0-or-later |
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``` |
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