GPN-Star
Collection
paper: https://www.biorxiv.org/content/10.1101/2025.09.21.677619v1 code: https://github.com/songlab-cal/gpn
•
30 items
•
Updated
•
5
chrom
stringclasses 5
values | pos
int32 257
30.4M
| ref
stringclasses 4
values | alt
stringclasses 4
values | AC
int64 1
2.03k
| AF
float64 0
1
| consequence
stringclasses 15
values | label
bool 2
classes |
|---|---|---|---|---|---|---|---|
1
| 284
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 286
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 288
|
A
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 298
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 301
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 306
|
G
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 314
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 322
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 332
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 334
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 346
|
C
|
T
| 489
| 0.241005
|
intergenic
| false
|
1
| 348
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 364
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 390
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 391
|
G
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 405
|
A
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 422
|
C
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 432
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 442
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 481
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 502
|
T
|
C
| 626
| 0.308526
|
intergenic
| false
|
1
| 508
|
T
|
C
| 1,289
| 0.635288
|
intergenic
| false
|
1
| 541
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 548
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 554
|
C
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 570
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 576
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 591
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 602
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 610
|
G
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 622
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 630
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 638
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 644
|
C
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 655
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 657
|
C
|
T
| 487
| 0.24002
|
intergenic
| false
|
1
| 674
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 698
|
G
|
A
| 1,069
| 0.526861
|
intergenic
| false
|
1
| 699
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 704
|
T
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 714
|
G
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 719
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 721
|
T
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 730
|
G
|
A
| 505
| 0.248891
|
intergenic
| false
|
1
| 733
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 743
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 755
|
T
|
C
| 1,069
| 0.526861
|
intergenic
| false
|
1
| 760
|
T
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 762
|
A
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 771
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 797
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 802
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 828
|
T
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 868
|
T
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 879
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 948
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 953
|
T
|
C
| 488
| 0.240513
|
intergenic
| false
|
1
| 955
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 968
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 973
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 980
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 997
|
A
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,009
|
A
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,016
|
G
|
T
| 488
| 0.240513
|
intergenic
| false
|
1
| 1,053
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,064
|
C
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,072
|
A
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,090
|
C
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,152
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,200
|
A
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,231
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,238
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,242
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,245
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,260
|
T
|
A
| 462
| 0.227698
|
intergenic
| false
|
1
| 1,261
|
T
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,277
|
A
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,294
|
A
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,305
|
A
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,309
|
A
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,312
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,315
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,394
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,399
|
G
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,408
|
A
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,414
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,475
|
C
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,481
|
G
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,509
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,533
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,582
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,608
|
T
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,655
|
C
|
A
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,657
|
A
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,658
|
A
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,689
|
T
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,691
|
C
|
G
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,759
|
A
|
T
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,791
|
A
|
C
| 1
| 0.000493
|
intergenic
| true
|
1
| 1,837
|
G
|
A
| 1
| 0.000493
|
intergenic
| true
|