GPN-Star
Collection
paper: https://www.biorxiv.org/content/10.1101/2025.09.21.677619v1 code: https://github.com/songlab-cal/gpn
•
30 items
•
Updated
•
5
chrom
string | pos
int64 | ref
string | alt
string | label
bool | consequence
string |
|---|---|---|---|---|---|
1
| 13,273
|
G
|
C
| false
|
non_coding_transcript_exon
|
1
| 14,464
|
A
|
T
| false
|
non_coding_transcript_exon
|
1
| 15,211
|
T
|
G
| false
|
intron
|
1
| 16,257
|
G
|
C
| false
|
intron
|
1
| 16,487
|
T
|
C
| false
|
intron
|
1
| 16,571
|
G
|
A
| false
|
intron
|
1
| 16,688
|
G
|
A
| false
|
non_coding_transcript_exon
|
1
| 17,697
|
G
|
C
| false
|
non_coding_transcript_exon
|
1
| 19,583
|
A
|
G
| false
|
intron
|
1
| 20,083
|
G
|
C
| true
|
intron
|
1
| 20,235
|
G
|
A
| false
|
intron
|
1
| 28,990
|
G
|
C
| true
|
intron
|
1
| 49,333
|
C
|
G
| true
|
intergenic
|
1
| 49,554
|
A
|
G
| false
|
intergenic
|
1
| 51,479
|
T
|
A
| false
|
upstream_gene
|
1
| 51,803
|
T
|
C
| false
|
upstream_gene
|
1
| 51,928
|
G
|
A
| false
|
upstream_gene
|
1
| 52,058
|
G
|
C
| false
|
upstream_gene
|
1
| 52,238
|
T
|
G
| false
|
upstream_gene
|
1
| 54,366
|
A
|
G
| false
|
intergenic
|
1
| 54,380
|
T
|
C
| false
|
intergenic
|
1
| 54,421
|
A
|
G
| false
|
intergenic
|
1
| 54,490
|
G
|
A
| false
|
intergenic
|
1
| 54,586
|
T
|
C
| false
|
intergenic
|
1
| 54,676
|
C
|
T
| false
|
intergenic
|
1
| 54,844
|
G
|
A
| false
|
intergenic
|
1
| 54,915
|
A
|
G
| true
|
intergenic
|
1
| 55,164
|
C
|
A
| false
|
intergenic
|
1
| 55,545
|
C
|
T
| false
|
intergenic
|
1
| 55,926
|
T
|
C
| false
|
intergenic
|
1
| 56,323
|
T
|
C
| true
|
intergenic
|
1
| 56,406
|
A
|
G
| true
|
intergenic
|
1
| 56,947
|
A
|
T
| true
|
upstream_gene
|
1
| 57,083
|
T
|
G
| true
|
upstream_gene
|
1
| 57,378
|
C
|
G
| true
|
upstream_gene
|
1
| 57,856
|
T
|
A
| false
|
intron
|
1
| 58,766
|
G
|
T
| true
|
non_coding_transcript_exon
|
1
| 58,771
|
T
|
C
| false
|
non_coding_transcript_exon
|
1
| 58,866
|
C
|
G
| false
|
intron
|
1
| 58,989
|
C
|
G
| false
|
intron
|
1
| 59,040
|
T
|
C
| false
|
intron
|
1
| 59,615
|
C
|
T
| false
|
intron
|
1
| 60,300
|
G
|
T
| true
|
intron
|
1
| 60,332
|
T
|
C
| false
|
intron
|
1
| 60,351
|
A
|
G
| false
|
intron
|
1
| 61,098
|
G
|
C
| true
|
intron
|
1
| 61,099
|
T
|
C
| false
|
intron
|
1
| 61,462
|
T
|
A
| false
|
intron
|
1
| 61,930
|
C
|
T
| true
|
intron
|
1
| 61,980
|
G
|
A
| true
|
intron
|
1
| 61,987
|
A
|
G
| false
|
intron
|
1
| 62,203
|
T
|
C
| false
|
intron
|
1
| 62,233
|
C
|
T
| true
|
intron
|
1
| 62,271
|
A
|
G
| false
|
intron
|
1
| 62,280
|
A
|
G
| true
|
intron
|
1
| 62,678
|
C
|
T
| true
|
intron
|
1
| 62,738
|
T
|
C
| false
|
intron
|
1
| 63,268
|
T
|
C
| false
|
non_coding_transcript_exon
|
1
| 63,378
|
T
|
C
| true
|
non_coding_transcript_exon
|
1
| 63,516
|
A
|
G
| false
|
non_coding_transcript_exon
|
1
| 63,527
|
T
|
C
| false
|
non_coding_transcript_exon
|
1
| 63,550
|
C
|
A
| true
|
non_coding_transcript_exon
|
1
| 63,671
|
G
|
A
| false
|
non_coding_transcript_exon
|
1
| 63,697
|
T
|
C
| false
|
non_coding_transcript_exon
|
1
| 64,025
|
T
|
C
| false
|
non_coding_transcript_exon
|
1
| 64,310
|
A
|
G
| false
|
downstream_gene
|
1
| 64,764
|
C
|
T
| false
|
upstream_gene
|
1
| 64,931
|
G
|
A
| false
|
upstream_gene
|
1
| 64,996
|
C
|
T
| true
|
upstream_gene
|
1
| 66,093
|
G
|
C
| true
|
intron
|
1
| 66,176
|
T
|
A
| false
|
intron
|
1
| 66,219
|
A
|
T
| false
|
intron
|
1
| 66,331
|
A
|
C
| false
|
intron
|
1
| 66,381
|
T
|
A
| false
|
intron
|
1
| 66,457
|
T
|
A
| false
|
intron
|
1
| 66,507
|
T
|
A
| false
|
intron
|
1
| 66,861
|
C
|
T
| false
|
intron
|
1
| 66,876
|
T
|
G
| false
|
intron
|
1
| 67,181
|
A
|
G
| false
|
intron
|
1
| 67,236
|
A
|
G
| true
|
intron
|
1
| 68,179
|
A
|
T
| false
|
intron
|
1
| 69,511
|
A
|
G
| false
|
missense
|
1
| 72,106
|
T
|
C
| false
|
downstream_gene
|
1
| 72,617
|
G
|
T
| true
|
intergenic
|
1
| 72,732
|
A
|
G
| true
|
intergenic
|
1
| 73,649
|
C
|
G
| false
|
intergenic
|
1
| 73,796
|
A
|
G
| true
|
intergenic
|
1
| 75,767
|
G
|
A
| false
|
intergenic
|
1
| 76,057
|
A
|
G
| false
|
intergenic
|
1
| 76,206
|
T
|
C
| false
|
intergenic
|
1
| 76,240
|
A
|
G
| false
|
intergenic
|
1
| 76,838
|
T
|
G
| false
|
intergenic
|
1
| 76,854
|
A
|
G
| false
|
intergenic
|
1
| 76,875
|
C
|
A
| true
|
intergenic
|
1
| 77,089
|
C
|
T
| false
|
intergenic
|
1
| 77,475
|
A
|
G
| true
|
intergenic
|
1
| 77,866
|
C
|
T
| false
|
intergenic
|
1
| 77,961
|
G
|
A
| false
|
intergenic
|
1
| 79,054
|
C
|
G
| true
|
intergenic
|
1
| 79,311
|
A
|
T
| true
|
intergenic
|