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1.0alpha7.train.1184
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1.0alpha7.train.1187
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1.0alpha7.train.1189
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1.0alpha7.train.1193
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1.0alpha7.train.1194
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1.0alpha7.train.1195
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1.0alpha7.train.1196
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15341176
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1.0alpha7.train.1197
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12514059
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1.0alpha7.train.1198
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15937422
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1.0alpha7.train.1199
|
22499735
|
[
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1.0alpha7.train.1200
|
20326653
|
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1.0alpha7.train.1201
|
5301557
|
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}
] |
1.0alpha7.train.1202
|
9655981
|
[
{
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],
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[
0,
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]
]
}
] |
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{
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64,
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96,
99
]
],
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{
"db_name": "interpro",
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}
]
}
] |
[] |
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{
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},
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"id": "1.0alpha7.train.1202.coref2",
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]
}
] |
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{
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"arg2_id": "1.0alpha7.train.1202.ent2_0",
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}
] |
1.0alpha7.train.1203
|
12609567
|
[
{
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"We show that Cos2 binds Ci, prevents its nuclear import, and inhibits its activity via this domain."
],
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[
0,
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]
]
}
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{
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"Ci"
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14,
18
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{
"db_name": "uniprot",
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}
]
}
] |
[] |
[
{
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]
},
{
"id": "1.0alpha7.train.1203.coref1",
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]
}
] |
[
{
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}
] |
1.0alpha7.train.1204
|
1570635
|
[
{
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"The fact that, in the presence of cofilin, the amount of S2-3 bound to F-actin is lower, compared with samples containing equal concentrations of S2-3 but no cofilin (and vice versa), and that the reduction in the F-actin bound S2-3 is compensated by an increase in bound cofilin of about similar size indicates that cofilin and S2-3 displace each other and therefore suggests that both proteins compete for the same or an overlapping site on F-actin."
],
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0,
451
]
]
}
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{
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158,
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{
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]
],
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150
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},
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71,
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]
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},
{
"id": "1.0alpha7.train.1204.ent12_1",
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214,
221
]
],
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},
{
"id": "1.0alpha7.train.1204.ent13_2",
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"text": [
"F-actin"
],
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[
443,
450
]
],
"normalized": []
}
] |
[] |
[
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] |
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] |
1.0alpha7.train.1205
|
3105025
|
[
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],
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0,
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]
]
}
] |
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154,
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220,
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],
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{
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},
{
"db_name": "uniprot",
"db_id": "O96006"
}
]
}
] |
[] |
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]
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] |
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1.0alpha7.train.1206
|
1368961
|
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1.0alpha7.train.1207
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24575595
|
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1.0alpha7.train.1208
|
627815
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1.0alpha7.train.1209
|
7557541
|
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0,
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[] |
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1.0alpha7.train.1210
|
1067081
|
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1.0alpha7.train.1211
|
15588154
|
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1.0alpha7.train.1213
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1.0alpha7.train.1214
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4672535
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1.0alpha7.train.1215
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15911130
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1.0alpha7.train.1216
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1.0alpha7.train.1217
|
4677183
|
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1.0alpha7.train.1218
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1.0alpha7.train.1222
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4183654
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1.0alpha7.train.1223
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11695992
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1.0alpha7.train.1228
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1.0alpha7.train.1229
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1650721
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1.0alpha7.train.1230
|
640004
|
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1.0alpha7.train.1231
|
12017835
|
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1.0alpha7.train.1232
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694827
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1.0alpha7.train.1233
|
24764806
|
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1.0alpha7.train.1237
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19543464
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1.0alpha7.train.1238
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12587149
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1.0alpha7.train.1239
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25182784
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] |
[] |
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] |
1.0alpha7.train.1245
|
5071898
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] |
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1.0alpha7.train.1246
|
22191798
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0,
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]
}
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}
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1.0alpha7.train.1247
|
3960847
|
[
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0,
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]
}
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] |
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] |
[] |
1.0alpha7.train.1248
|
15178706
|
[
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],
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[
0,
160
]
]
}
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] |
1.0alpha7.train.1249
|
15820886
|
[
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"To investigate whether the binding of E1A to p300 correlates with a loss of p300 transcriptional activity, we examined the binding of full-length E1A to the series of mutant p300 proteins."
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0,
193
]
]
}
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179,
183
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},
{
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}
]
}
] |
[] |
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] |
1.0alpha7.train.1250
|
11246712
|
[
{
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"type": "sentence",
"text": [
"First, gel-shift analysis shows that bacterially expressed Xvent-1 homeodomain binds to the labelled BIE fragment in a concentration-dependent manner, with higher protein concentrations leading to the formation of oligomers (Figure 4A)."
],
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[
0,
239
]
]
}
] |
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{
"id": "1.0alpha7.train.1250.ent0_0",
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"id": "1.0alpha7.train.1250.ent1_0",
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"text": [
"BIE"
],
"offsets": [
[
103,
106
]
],
"normalized": []
}
] |
[] |
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}
] |
1.0alpha7.train.1251
|
9579260
|
[
{
"id": "1.0alpha7.train.1251.sent",
"type": "sentence",
"text": [
"From the data described above, we hypothesized that PS1 somehow promotes translocation of the QM protein from the cytoplasm to the nucleus, inhibits the binding of c-Jun homodimer to TRE, and thereby suppresses transactivation by c-jun."
],
"offsets": [
[
0,
236
]
]
}
] |
[
{
"id": "1.0alpha7.train.1251.ent0_0",
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],
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183,
186
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1.0alpha7.train.1253
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1.0alpha7.train.1254
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2841329
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1.0alpha7.train.1257
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4976845
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1.0alpha7.train.1258
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2221680
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1.0alpha7.train.1259
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1937000
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1.0alpha7.train.1260
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15388587
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1.0alpha7.train.1261
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12993353
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1.0alpha7.train.1262
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2853990
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1.0alpha7.train.1263
|
3806927
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] |
[] |
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1.0alpha7.train.1264
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6906196
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1.0alpha7.train.1265
|
22317757
|
[
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"In the presence of the fibronectin-like domain, which binds tightly to both collagen and gelatin [15], [16], [19], further breakdown of the 1/4 and 3/4 fragments occurs, even at 25°C, which is generally regarded as insufficient to denature the 3/4 fragment."
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]
]
}
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[] |
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1.0alpha7.train.1266
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888045
|
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[] |
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1.0alpha7.train.1267
|
5164945
|
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]
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1.0alpha7.train.1268
|
25150857
|
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1.0alpha7.train.1269
|
5378815
|
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1.0alpha7.train.1270
|
1544640
|
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1.0alpha7.train.1271
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22415269
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1.0alpha7.train.1272
|
4077383
|
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1.0alpha7.train.1273
|
9486059
|
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1.0alpha7.train.1274
|
12790018
|
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] |
[] |
1.0alpha7.train.1275
|
8864622
|
[
{
"id": "1.0alpha7.train.1275.sent",
"type": "sentence",
"text": [
"Total DB[a,l]PDE-DNA binding in MCF-7 cells after exposure to (A) 0.01 μM and (B) 0.05 μM (+)-syn- or (-)-anti-DB[a,l]PDE for the times indicated. "
],
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0,
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]
]
}
] |
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]
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]
],
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] |
[] |
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1.0alpha7.train.1276
|
12017934
|
[
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],
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0,
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]
}
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244,
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] |
[] |
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1.0alpha7.train.1277
|
3796429
|
[
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{
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}
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] |
[] |
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1.0alpha7.train.1278
|
19523603
|
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1.0alpha7.train.1279
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16288521
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1.0alpha7.train.1280
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11794196
|
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1.0alpha7.train.1281
|
9509284
|
[
{
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"The structural homology between the ankyrin binding domain of Tiam1 (the sequence between amino acids 717 and 727) and CD44 is quite striking ( Lokeshwar et al. 1994 )."
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0,
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1.0alpha7.train.1282
|
54807
|
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1.0alpha7.train.1283
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25375275
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"id": "1.0alpha7.train.1283.ent2_0",
"type": "assay",
"text": [
"EMSAs"
],
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[
0,
5
]
],
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},
{
"id": "1.0alpha7.train.1283.ent3_0",
"type": "DNA",
"text": [
"Clk locus"
],
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[
73,
82
]
],
"normalized": []
},
{
"id": "1.0alpha7.train.1283.ent4_0",
"type": "protein",
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"VRI"
],
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[
15,
18
]
],
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},
{
"id": "1.0alpha7.train.1283.ent5_0",
"type": "DNA",
"text": [
"E4BP4-consensus sites"
],
"offsets": [
[
40,
61
]
],
"normalized": []
}
] |
[] |
[
{
"id": "1.0alpha7.train.1283.coref0",
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"1.0alpha7.train.1283.ent0_0"
]
},
{
"id": "1.0alpha7.train.1283.coref1",
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]
},
{
"id": "1.0alpha7.train.1283.coref2",
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{
"id": "1.0alpha7.train.1283.coref3",
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"1.0alpha7.train.1283.ent3_0"
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},
{
"id": "1.0alpha7.train.1283.coref4",
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},
{
"id": "1.0alpha7.train.1283.coref5",
"entity_ids": [
"1.0alpha7.train.1283.ent5_0"
]
}
] |
[
{
"id": "1.0alpha7.train.1283.rel0s1.0alpha7.train.1283.ent4_0.o1.0alpha7.train.1283.ent5_0",
"type": "bind",
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{
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"arg1_id": "1.0alpha7.train.1283.ent1_0",
"arg2_id": "1.0alpha7.train.1283.ent5_0",
"normalized": []
}
] |
1.0alpha7.train.1284
|
11711376
|
[
{
"id": "1.0alpha7.train.1284.sent",
"type": "sentence",
"text": [
"Induction of the GST-GCN2(1-312) construct conferred slightly less 3AT sensitivity than that given by GST-GCN2(1-572) (Figure 5B, rows 3 and 5), in accordance with the relatively weaker binding of GCN1/20 to GCN2 amino acids 1-272 versus amino acids 1-572 shown above (Figure 3B)."
],
"offsets": [
[
0,
280
]
]
}
] |
[
{
"id": "1.0alpha7.train.1284.ent0_0",
"type": "experimental-construct",
"text": [
"GST-GCN2(1-312)"
],
"offsets": [
[
17,
32
]
],
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},
{
"id": "1.0alpha7.train.1284.ent1_0",
"type": "experiment-tag",
"text": [
"GST"
],
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[
17,
20
]
],
"normalized": []
},
{
"id": "1.0alpha7.train.1284.ent2_1",
"type": "experiment-tag",
"text": [
"GST"
],
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[
102,
105
]
],
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},
{
"id": "1.0alpha7.train.1284.ent3_0",
"type": "protein-region",
"text": [
"GCN2(1-312)"
],
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[
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]
],
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},
{
"id": "1.0alpha7.train.1284.ent4_0",
"type": "protein-complex",
"text": [
"GCN1/20"
],
"offsets": [
[
197,
204
]
],
"normalized": []
},
{
"id": "1.0alpha7.train.1284.ent5_0",
"type": "protein",
"text": [
"GCN2"
],
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[
21,
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],
"normalized": [
{
"db_name": "NCBI gene",
"db_id": "440275"
},
{
"db_name": "hgnc",
"db_id": "EIF2AK4"
},
{
"db_name": "uniprot",
"db_id": "Q9P2K8"
}
]
},
{
"id": "1.0alpha7.train.1284.ent6_1",
"type": "protein",
"text": [
"GCN2"
],
"offsets": [
[
106,
110
]
],
"normalized": [
{
"db_name": "NCBI gene",
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},
{
"db_name": "hgnc",
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{
"db_name": "uniprot",
"db_id": "Q9P2K8"
}
]
},
{
"id": "1.0alpha7.train.1284.ent7_2",
"type": "protein",
"text": [
"GCN2"
],
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[
208,
212
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],
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{
"db_name": "NCBI gene",
"db_id": "440275"
},
{
"db_name": "hgnc",
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},
{
"db_name": "uniprot",
"db_id": "Q9P2K8"
}
]
},
{
"id": "1.0alpha7.train.1284.ent8_0",
"type": "protein-region",
"text": [
"GCN2(1-572)"
],
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[
106,
117
]
],
"normalized": []
},
{
"id": "1.0alpha7.train.1284.ent9_0",
"type": "experimental-construct",
"text": [
"GST-GCN2(1-572)"
],
"offsets": [
[
102,
117
]
],
"normalized": []
}
] |
[] |
[
{
"id": "1.0alpha7.train.1284.coref0",
"entity_ids": [
"1.0alpha7.train.1284.ent0_0"
]
},
{
"id": "1.0alpha7.train.1284.coref1",
"entity_ids": [
"1.0alpha7.train.1284.ent1_0",
"1.0alpha7.train.1284.ent2_1"
]
},
{
"id": "1.0alpha7.train.1284.coref2",
"entity_ids": [
"1.0alpha7.train.1284.ent3_0"
]
},
{
"id": "1.0alpha7.train.1284.coref3",
"entity_ids": [
"1.0alpha7.train.1284.ent4_0"
]
},
{
"id": "1.0alpha7.train.1284.coref4",
"entity_ids": [
"1.0alpha7.train.1284.ent5_0",
"1.0alpha7.train.1284.ent6_1",
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]
},
{
"id": "1.0alpha7.train.1284.coref5",
"entity_ids": [
"1.0alpha7.train.1284.ent8_0"
]
},
{
"id": "1.0alpha7.train.1284.coref6",
"entity_ids": [
"1.0alpha7.train.1284.ent9_0"
]
}
] |
[
{
"id": "1.0alpha7.train.1284.rel0s1.0alpha7.train.1284.ent4_0.o1.0alpha7.train.1284.ent5_0",
"type": "bind",
"arg1_id": "1.0alpha7.train.1284.ent4_0",
"arg2_id": "1.0alpha7.train.1284.ent5_0",
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},
{
"id": "1.0alpha7.train.1284.rel0s1.0alpha7.train.1284.ent4_0.o1.0alpha7.train.1284.ent6_1",
"type": "bind",
"arg1_id": "1.0alpha7.train.1284.ent4_0",
"arg2_id": "1.0alpha7.train.1284.ent6_1",
"normalized": []
},
{
"id": "1.0alpha7.train.1284.rel0s1.0alpha7.train.1284.ent4_0.o1.0alpha7.train.1284.ent7_2",
"type": "bind",
"arg1_id": "1.0alpha7.train.1284.ent4_0",
"arg2_id": "1.0alpha7.train.1284.ent7_2",
"normalized": []
}
] |
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