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BioCRNpyler: Compiling Chemical Reaction Networks from Biomolecular Parts in Diverse Contexts
synthetic biology
Centrosomal P4.1-associated protein (CPAP) positively regulates endocytic vesicular transport and lysosome targeting of EGFR
cell biology
Permutation tests for hypothesis testing with animal social data: problems and potential solutions
animal behavior and cognition
Data-driven causal analysis of observational time series in ecology
bioinformatics
RNAlign2D, a novel RNA structural alignment tool based on pseudo-amino acid substitution matrix
bioinformatics
Climate risk to European fisheries and coastal communities
ecology
Change in liana density over 30 years in a Bornean rain forest supports the escape hypothesis
ecology
Homeostatic cerebellar compensation of age-related changes of vestibulo-ocular reflex adaptation: a computational epidemiology study
neuroscience
Adaptive learning through temporal dynamics of state representation
neuroscience
Predictive visual motion extrapolation emerges spontaneously and without supervision at each layer of a hierarchical neural network with spike-timing-dependent plasticity
neuroscience
Control of aperture closure during reach-to-grasp movements in immersive haptic-free virtual reality
neuroscience
Effect of Handedness on Learned Controllers and Sensorimotor Noise During Trajectory-Tracking
neuroscience
Memory for stimulus durations is not bound to spatial information
neuroscience
A dynamical system model for predicting gene expression from the epigenome
systems biology
Intestinal infection results in impaired lung innate immunity to secondary respiratory infection.
immunology
Noise-robust recognition of objects by humans and deep neural networks
neuroscience
CSDE1 is a Post-Transcriptional Regulator of the LDL Receptor
genomics
A novel combination of Class-I fumarases and metabolites (α-ketoglutarate and fumarate) signal the DNA damage response in E. coli.
microbiology
Illumina iSeq 100 and MiSeq exhibit similar performance in freshwater fish environmental DNA metabarcoding
ecology
Evolutionary mechanisms that determine which bacterial genes are carried on plasmids
evolutionary biology
Ventral Pallidum GABA Neurons Mediate Motivation Underlying Risky Choice
neuroscience
FDR control in GWAS with population structure
genomics
Fitness benefits of providing services to others: Grooming predicts survival in a neotropical primate
animal behavior and cognition
Seasonal climate variations promote bacterial α-diversity in soil
ecology
A quick and easy way to estimate entropy and mutual information for neuroscience
neuroscience
Temperature Effect on Polymerase Fidelity
biochemistry
Characterization of extracellular vesicles and artificial nanoparticles with four orthogonal single-particle analysis platforms
cell biology
Effect of sub-lethal prenatal endotoxemia on murine placental transport systems and lipid homeostasis
physiology
Super-human cell death detection with biomarker-optimized neural networks
cell biology
The evolution of trait correlations constrains phenotypic adaptation to high CO2 in a eukaryotic alga
microbiology
An acylsugar-deficient Nicotiana benthamiana strain for aphid and whitefly research
plant biology
Recombinant SARS-CoV-2 genomes are currently circulating at low levels
evolutionary biology
Phenotyping the preterm brain: characterising individual deviations from normative volumetric development in two large infant cohorts
neuroscience
Temperature-dependent effects of house fly proto-Y chromosomes on gene expression
evolutionary biology
Common and distinct roles of frontal midline theta and occipital alpha oscillations in coding temporal intervals and spatial distances
neuroscience
Automatic inference of demographic parameters using Generative Adversarial Networks
genomics
Songbirds can learn flexible contextual control over syllable sequencing
neuroscience
Dendrimer-targeted immunosuppression of microglia reactivity super-accelerates photoreceptor regeneration in the zebrafish retina
neuroscience
Inhibition of SARS-CoV-2 polymerase by nucleotide analogs: a single moleculeperspective
biophysics
MICROBIOTA-MEDIATED COMPETITION BETWEEN DROSOPHILA SPECIES
evolutionary biology
Spatially Explicit Modeling of Community Occupancy using Markov Random Field Models with Imperfect Observation: Mesocarnivores in Apostle Islands National Lakeshore
ecology
QTL mapping in an interspecific sorghum population uncovers candidate regulators of salinity tolerance
genomics
Heterogenous susceptibility to R-pyocin killing in populations of Pseudomonas aeruginosa sourced from cystic fibrosis lungs
microbiology
Sexual Reproduction in Bdelloid Rotifers
evolutionary biology
Increased oscillatory power in a computational model of the olfactory bulb due to synaptic degeneration
neuroscience
Common synaptic phenotypes arising from diverse mutations in the human NMDA receptor subunit GluN2A
neuroscience
GwEEP - A comprehensive approach for genome-wide efficiency profiling of DNA modifying enzymes
genomics
Nutrient dominance governs the assembly of microbial communities in mixed nutrient environments
ecology
Confidence-controlled Hebbian learning efficiently extracts category membership from stimuli encoded in view of a categorization task
neuroscience
AtHDA15 attenuates COP1 via transcriptional quiescence, direct binding, and sub-compartmentalization during photomorphogenesis
plant biology
Cellular barcoding of protozoan pathogens reveals the within-host population dynamics of Toxoplasma gondii host colonization
microbiology
Memory Trace Imbalance in Reinforcement and Punishment Systems Can Reinforce Implicit Choices Leading to Obsessive-Compulsive Behavior
neuroscience
Reliability assessment of temporal discounting measures in virtual reality environments
neuroscience
Egg size variation in a long-lived polyandrous shorebird in the context of senescence and breeding phenology
evolutionary biology
Individual human genomes frequently contain variants that have evolutionary couplings
genetics
Aggregation Tool for Genomic Concepts (ATGC): A deep learning framework for sparse genomic measures and its application to tumor mutational burden
bioinformatics
The Pancreatic Tumor Microenvironment Compensates for Loss of GOT2
cancer biology
Prophylactic efficacy of riluzole against anxiety- and depressive-like behaviors in two rodent stress models
pharmacology and toxicology
Septins and a formin have distinct functions in anaphase chiral cortical rotation in the C. eleganszygote.
cell biology
Contemporary and historical selection in Tasmanian devils (Sarcophilus harrisii) support novel, polygenic response to transmissible cancer
evolutionary biology
Raven: a de novo genome assembler for long reads
bioinformatics
Ig-VAE: Generative Modeling of Immunoglobulin Proteins by Direct 3D Coordinate Generation
bioinformatics
Regulatory signatures of drought response in stress resilient Sorghum bicolor
plant biology
Comparison of polygenic risk scores for heart disease highlights obstacles to overcome for clinical use
genetics
The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA
plant biology
Dissecting the microenvironment around biosynthetic scaffolds in murine skin wound healing
immunology
Quantity and quality of suitable matrices matter in reducing the negative effect of fragmentation on populations' extinction risk
ecology
A comprehensive transcriptome signature of murine hematopoietic stem cell aging
cell biology
The record of Deinotheriidae from the Miocene of the Swiss Jura Mountains (Jura Canton, Switzerland)
paleontology
Probabilistic, entropy-maximizing control of large-scale neural synchronization
neuroscience
Dysregulation of the secretory pathway connects Alzheimer's disease genetics to aggregate formation
neuroscience
Predictive coding of natural images by V1 activity revealed by self-supervised deep neural networks
neuroscience
Unification of Sparse Bayesian Learning Algorithms for Electromagnetic Brain Imaging with the Majorization Minimization Framework
neuroscience
A hardware/software system for electrophysiology "supersessions" in marmosets
neuroscience
Cell-specific imputation of drug connectivity mapping with incomplete data
bioinformatics
Inhibition of histone readers bromodomain extra-terminal proteins alleviates skin fibrosis in experimental models of scleroderma
pharmacology and toxicology
SDC3 acts as a timekeeper of myogenic differentiation by regulating the insulin/AKT/mTOR axis in muscle stem cell progeny
cell biology
Rapid SARS-CoV-2 Adaptation to Available Cellular Proteases
microbiology
ATP-responsive biomolecular condensates tune bacterial kinase signaling
microbiology
Petabase-scale sequence alignment catalyses viral discovery
bioinformatics
Discovery of a protein uptake pathway in lysosomes
cell biology
FAIRSCAPE: A Framework for FAIR and Reproducible Biomedical Analytics
bioinformatics
A Proteome-scale Analysis of Vertebrate Protein Amino Acid Occurrence: Thermoadaptation shows a Correlation with Protein Solvation but less so with Dynamics
biophysics
C/EBPB-dependent Adaptation to Palmitic Acid Promotes Stemness in Hormone Receptor Negative Breast Cancer
cancer biology
Jasmonic Acid coordinates with Light, Glucose and Auxin signalling in Regulating Branching Angle of Arabidopsis Lateral Roots
plant biology
Mycobacterium tuberculosis SufR Responds to Nitric oxide via its 4Fe-4S cluster and Regulates Fe-S cluster Biogenesis for Persistence in Mice
microbiology
Dengue emergence in the temperate Argentinian province of Santa Fe, 2009-2020.
microbiology
Co-evolutionary signals from Burkholderia pseudomallei genomics identify its survival strategies and highlight improving environmental health as prevention policy
microbiology
Perceptual difficulty modulates the direction of information flow in familiar face recognition
neuroscience
Investigating molecular mechanisms of 2A-stimulated ribosomal pausing and frameshifting in Theilovirus
molecular biology
Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch
molecular biology
Targeting KRAS-mutant stomach/colorectal tumours by disrupting the ERK2-p53 complex
cancer biology
Heat-treated virus inactivation rate depends strongly on treatment procedure: illustration with SARS-CoV-2
microbiology
Why are rare variants hard to impute? Coalescent models reveal theoretical limits in existing algorithms.
genetics
The Contributions from the Progenitor Genomes of the Mesopolyploid Brassiceae are Evolutionarily Distinct but Functionally Compatible
genomics
Highly-parallel microfluidics-based force spectroscopy on single cytoskeletal motors
biophysics
Individual heterogeneity and its importance for metapopulation dynamics.
ecology
Adolescent Alcohol Binge-Drinking compromises behaviors during adulthood without triggering neuroinflammation
animal behavior and cognition
Red deer Cervus elaphus blink more in larger groups
animal behavior and cognition
The sex-specific VC neurons are mechanically activated motor neurons that facilitate serotonin-induced egg laying in C. elegans
neuroscience